KEGG   Populus trichocarpa (black cottonwood): 7482230
Entry
7482230           CDS       T01077                                 
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
  KO
K14759  isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00130  Ubiquinone and other terpenoid-quinone biosynthesis
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
pop01240  Biosynthesis of cofactors
Module
pop_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    7482230
Enzymes [BR:pop01000]
 2. Transferases
  2.2  Transferring aldehyde or ketonic groups
   2.2.1  Transketolases and transaldolases
    2.2.1.9  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
     7482230
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.113  o-succinylbenzoate synthase
     7482230
   4.2.99  Other carbon-oxygen lyases
    4.2.99.20  2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
     7482230
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.4  Transferring hydroxy groups
    5.4.4.2  isochorismate synthase
     7482230
SSDB
Motif
Pfam: MR_MLE_C TPP_enzyme_M_2 Abhydrolase_6 Abhydrolase_1 TPP_enzyme_N Hydrolase_4 TPP_enzyme_C Abhydrolase_2 Thioesterase MenC_N Abhydrolase_3 BAAT_C DUF676 Ndr DUF726 DLH LIDHydrolase DUF900 Abhydrolase_11 Esterase
Other DBs
NCBI-GeneID: 7482230
NCBI-ProteinID: XP_024466567
Position
10:15077185..15094023
AA seq 1716 aa
MKPHILLLTNNLPLPSPNLPFGTRKSLPLAFLSRNTSIHFPRFQSPKFKVVEAVRFDCPV
TDVTELEGEDCELVLETCITRTLPPALTLERGIESIKAAVDDLKSNPPCSLHGVFRFQVA
VPPSPKALNWFCSLPESDGVFPRFFLSKETEDASCKKLYLHRTRGVFGLGSAICFEASSY
RAPEKLKRIRRYLSSDSTHIMTYGFMDINFNKESSSIKHEAGSFYFLIPEVELDEQEEAS
ILVITLAWDENSCWTFEQAIQSFESSIDQASFCFWPDTERCYSKCIKSTFRNFNLMEAKT
FQMACTDALFLDRRDYQADTTELVSPFSWTIFSTQFCFRLSPVVGVSSNMLDDAGETSYS
LQDQSNINAVWASLIVEECSRLGIMYFCVAPGSRSSPLAIAASTHPLTTCISCFDERSLA
FHAVGYSKGSHKPAVIITSSGTAVSNLLPAVVEASQDFVPLLLLTADRPPELLDAGANQA
INQVNHFGSFVRFTFSLPAPTDNIPARMVLTTIDSAVHWATSLPYGPVHINCPFREPLDD
SSDNWMLSCLKGLDIWMSGAEPFTKYIQLQNSLACKDGACVPMAEVLEIIKGTDRGLLLL
GAIHTEDEIWAALILAKHLNWPVVADILSGLRLRKLLPSLPEIEENVLFVDHLDHALLSE
WVRGWIRFDVIVQIGSRITSKRVSQMMEECFPCTYILVDNHPCRHDPSHFVTHRVQCSIR
QFADSLMKAQFSHRNSKWCCFLRVLNTMVAWDISFQINAENSLTEPHVAHVITEALSAES
ALFVGNSMVIRDADMYGHNCKTHAHSIAHMMLDSKLPYLGIRVAGNRGASGIDGLLSTAI
GFAVGCNKQVLCLVGDVSMLHDTNGLAILTQRVSRKPMRILVINNHGGAIFSLLPIADKT
DPRILDQYFYTSHRISIHKLCAAHSVRHLRVKTKVQLQEALLKFEHEKTDCVIEVESGIG
ANSTFHSTLRKSAQQAADHALSILSRLSVRVSISDGLFLCKIHKMDFSLYRIQLCAPPTS
SSVDHHQNEFHREGYILSVSLEDGSVGYGEVAPLEIHKENLADVEEQLLFLLHVIKGIKI
NVSLPILKGSFTSWIWSNLGIMECSIFPSVRCGLEMAVLNAIAVSQGSSFISMLQPWMIN
EEIYEKSSVKICALIDSNGTPTEVAYIASSLVEEGFTAIKLKVARRADPIQDATVICKVR
KEVGPCIELRADANRKWTYEEAIQFGFLVKDCDLQYIEEPVENVDDIVKFCEETGLPAAL
DETIDNFQESHLKMLAKYTHPGIVAVVIKPSVVGGFEKAALIARWAQKHGKMAVVSAAFE
SGLGLSTYILFSYYLEQLNAVYTVMNRETRPSIAHGLGTYRWLKQDVTAIPLGIHYDPCK
GFVGASVAASIQLLQNFQVNNNVIHKTFNEEQVHRYHLTVNSKNFSYSIKVHEVGQESND
NVVIFLHGFLGTGEDWVPIMKAISRSAKCISIDLPGHGGSKIQNHGSEGAQEEATLSIEI
VADVLYKLIQGITPFKVTLVGYSMGARIALHMALRLSHKIDGAVIISGSPGLKDTMARKI
RQAKDDSRADFLVAYGLELFLDSWYAGELWKSLRSHPHFKEIVAGRLVHEDVQSLAKALS
GLSTGSQLPLWEDLKRCDLPLLLIVGEKDAKFKSIAQKMFHEVVQDRKGEDRRGNNICEI
LEVPNCGHAVHLENPLPIISAMRKFLTRGRSSRAQQ
NT seq 5151 nt   +upstreamnt  +downstreamnt
atgaagcctcacatattattacttacaaacaatctccctttaccatctccaaatcttccc
tttggaacaagaaagtctctccctctcgcatttctcagcagaaacacttccattcacttc
cctcgctttcaaagccctaaatttaaggttgttgaagcggtgagatttgattgtcccgta
acggacgttactgaattggaaggcgaggattgtgagttggtgcttgagacttgcatcacg
cgcacattgcctccggcattgacgctggagcgagggatagagagcattaaggctgccgtg
gatgatttaaagtcgaatcctccgtgttctcttcacggtgttttcagatttcaggttgct
gtgccgccgagtccaaaagctttgaattggttctgctcgctaccggagtcggatggtgtg
ttccctcgtttttttctaagcaaggagacagaggatgcgtcgtgcaaaaaactctatttg
cataggactcgtggagttttcgggcttggatcagcaatttgctttgaagcgtcctcttac
cgtgctccagaaaagctgaagaggatcagaagatatctctcaagtgattccacccatata
atgacttatggttttatggatattaatttcaacaaggagtcatcttcaatcaagcatgag
gctggttcgttttacttcttgattcctgaggttgagttagatgagcaagaagaagcatct
attcttgtcataactttggcatgggatgaaaattcctgctggacttttgaacaagcaatt
caatcttttgagtcatccattgaccaggccagtttttgcttttggccagacacagagaga
tgctattccaagtgcataaaatctaccttcagaaatttcaatttgatggaggctaaaaca
ttccagatggcttgtacagatgctctgtttttggacagaagggattatcaggctgacacc
acagaactggtatcccctttttcctggaccatattttccactcagttttgtttcaggctt
tcaccagtggtaggcgtttcgagtaacatgttggatgatgctggtgaaacaagttactct
ctgcaagatcaatcaaatatcaatgctgtttgggcttcacttatagtggaagaatgttct
cgtcttggtataatgtacttttgtgtagctccaggctcaagatcatcgcctcttgccatc
gctgcttccactcatcccctaacaacatgtatttcatgctttgatgagcgctctcttgca
tttcatgctgttggttattcaaaggggtctcataaaccagcagtcatcataacatcatca
ggcactgcagtttcaaatcttcttcctgctgttgtggaagctagtcaggattttgtgcca
cttctattgctgaccgcagatcgtcctcctgagcttcttgatgctggggcaaaccaagca
attaatcaggtgaaccattttggttcttttgtgaggttcaccttcagtcttcctgcacct
actgataatattcctgcgcggatggtgcttacgacaattgactccgctgtgcattgggca
acctctttgccatatggccctgttcatattaattgtcctttcagagagcctctggatgat
agttcagacaattggatgttaagctgtttaaaaggattggatatttggatgtctggtgcg
gaaccattcactaaatatattcaattgcaaaattctcttgcatgtaaagatggtgcttgt
gtcccaatggcagaggttcttgaaataattaaagggactgatagagggcttttacttctt
ggtgcaattcacacagaagatgaaatatgggcggcgcttattttggctaaacaccttaat
tggcctgttgtagctgacatcttatcagggctaagattaagaaagctccttccttctctt
cctgaaattgaagagaatgttttatttgttgatcatctagaccatgctttactgtcggaa
tgggtcaggggttggattcgttttgatgtgattgttcagattggaagccgaataacaagc
aagcgtgttagtcaaatgatggaagaatgttttccgtgcacatatatcttagttgacaac
cacccgtgccgtcacgatccatcacattttgtaacacacagagtgcagtgctccattcgt
cagtttgctgacagcttaatgaaagctcaattttcacacaggaacagcaaatggtgttgt
tttctacgagttttgaatacaatggttgcctgggatatatcatttcaaattaacgcagag
aactcattaaccgagcctcatgttgcacatgtaattacagaagctctttcagccgagtct
gctctttttgttggcaacagcatggtaatacgcgatgcagacatgtatggacacaattgt
aaaactcatgctcatagcattgcacatatgatgttagactcaaaacttccatatcttggg
ataagagtggctggcaacaggggagctagtggtattgatggtttgcttagcacagcaatt
ggttttgctgttggatgcaataaacaagtgctttgtttggttggagatgtttctatgctt
catgatacaaatggcttggcaattttgactcagagggtgtcaaggaaaccaatgaggata
cttgtgataaacaatcatggtggagcaattttcagtctccttcctattgcagataaaact
gaccctcgaatattggatcagtatttctacacttcccatagaatatcaattcataaactt
tgtgcggcacacagtgtgagacatttacgagtgaagacgaaggtgcaacttcaagaggct
ttacttaaatttgaacatgagaagacagattgtgtaattgaagtggagagcggcattggt
gccaattcaaccttccacagtactttaagaaaatctgcacagcaagcagcagatcatgct
ttaagcattctctcaaggctttctgttcgagtttccatttcagatgggttatttctctgc
aagatccataaaatggatttttcactgtacagaattcaactctgtgctcctcctacctcg
agctctgttgatcatcatcagaatgagttccatagggaaggttatattttatccgtgtct
cttgaagatggaagtgttgggtatggtgaggttgcacctcttgaaatccacaaagaaaat
ctggcggatgtagaagagcagcttctatttcttcttcatgtcattaaaggaatcaagatt
aatgtttcccttcccattctgaaaggctctttcacttcttggatatggagcaacttagga
attatggaatgttcaatctttccaagtgttagatgtggtcttgaaatggctgtcttgaac
gccatagcagtaagtcaaggttccagttttataagtatgcttcaaccttggatgataaat
gaggaaatttatgaaaagtcaagcgttaagatatgtgcccttattgattctaacgggact
cccactgaggttgcttatattgcttcctcacttgttgaagaaggattcactgcaataaaa
ctcaaagttgcacgtcgggcagatcccattcaagatgctacagttatatgcaaagtacga
aaggaagttggtccatgtattgaactccgtgcggatgccaacagaaaatggacctatgaa
gaagctatccagtttggcttccttgtaaaagattgtgacctacaatatattgaggaacct
gttgagaatgttgatgatattgtgaagttttgtgaagaaactggcttacctgcagctctt
gatgaaactatcgacaattttcaagaaagtcatcttaaaatgcttgcgaagtatactcac
cctggaatagttgctgtggttatcaaaccaagtgttgttggtgggtttgaaaaggcagca
ttaattgcacgatgggcacagaagcatggaaaaatggctgttgttagtgctgcatttgaa
agtggcttaggtttgtcaacttatattctattctcctattacctggagcagctgaatgct
gtttatacagttatgaaccgtgaaaccaggccatctatagcccatggtcttggaacttat
agatggcttaaacaagatgtcacagctatacctcttgggattcattatgatccatgtaaa
ggctttgtcggagcatctgttgctgcttccattcaactcctacagaactttcaagtcaat
aacaatgttattcacaaaacttttaatgaagagcaagttcatagatatcatttgacagtg
aattcaaagaatttttcctactccatcaaagttcatgaagttggacaagaaagcaatgat
aatgttgttatatttcttcatggatttcttggaactggtgaagattgggtccccatcatg
aaggccatctcaagatcagcaaaatgcatttcaattgatcttccgggacatgggggatca
aaaatacaaaatcatggtagtgagggagcccaagaggaagcaactttgtcaattgaaata
gttgcagatgtattatataagttgattcaaggcataactccttttaaggttaccctggtt
ggatattctatgggagctaggattgcattgcacatggcactaaggcttagtcataagatt
gatggagctgttataatatctggtagccctggcctgaaggatacaatggcaagaaaaatc
cgtcaggctaaagatgattctagggcagacttccttgttgcctatggtttagaactcttt
cttgattcctggtatgctggagagctctggaagagcctgagaagtcatccccattttaag
gaaatagttgctggccgcttggtgcacgaggatgtccaaagccttgcaaaagctctgtca
ggcctcagcactgggagccagctgccattgtgggaagacttgaagcgatgtgatttgccc
cttttactcattgttggagagaaagatgcgaagttcaagtcaattgctcaaaaaatgttc
catgaagttgtccaagataggaaaggtgaagaccgcagggggaacaatatttgtgagata
cttgaggttcccaattgtggtcatgctgttcatttggaaaaccctcttcctattattagt
gccatgaggaaatttttgaccagaggaaggagttccagagcacaacagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (8)   
   KEGG ENZYME (4)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (20)   
   Pfam (20)   
All databases (57)   

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