KEGG   Populus trichocarpa (black cottonwood): POPTR_0002s12790gHelp
Entry
POPTR_0002s12790g CDS       T01077                                 

Definition
hypothetical protein
Orthology
K01176  
alpha-amylase [EC:3.2.1.1]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Starch and sucrose metabolism
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    POPTR_0002s12790g
Enzymes [BR:pop01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.1  alpha-amylase
     POPTR_0002s12790g
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
LGII
AA seq 422 aa AA seqDB search
MRFLTFCFFSLFLSVFPLFTSSALLFQGFNWESCNQAGGWYNSLKNLVPDLANAGITHVW
LPPASQSVAPQGYMPGRLYDLSASKYGSQGELKSLIGAFHQKGIKCLADIVINHRTAEKQ
DGRGIWCIFEGGTSDDRLDWGPSLICSDDTAYSDGKGNPDTGDNFRGAPDIDHLNPRVQK
ELSDWMNWLKSEIGFDGWRFDFVRGYAPSITKIYMENTSPDFAVGEKWDSLAYGQDGKPD
YNQDAHRGGLKDWIQAAGGAVTAFDFTTKGILQAAVQGELWRLKDSNGKPPGLIGLLPQN
AVTFIDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGLKEEIGKLATI
RKTSGIGSASTVNILASDADLYVAAIDGNMIMKIGPKMDLGNLIPSNFQVATSGADYCVW
VK
NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt
atgagatttctcactttctgcttcttctctctcttcctctcagttttccctttgttcact
tcttctgctttgttatttcaggggttcaactgggagtcatgtaatcaggcaggaggatgg
tacaactcactaaagaacttagttcctgatttggctaatgctggaattactcatgtctgg
cttcctccagcctctcagtcagttgcaccgcaaggatatatgccaggcaggctgtatgat
ctgagtgcatcaaaatatggatctcagggtgaattgaaatcactaattggggctttccat
cagaagggaattaaatgcctggcagacattgtcataaaccatagaactgctgagaagcaa
gatgggagaggaatatggtgcatttttgaaggtggaacttctgatgatcgccttgactgg
gggccgtccctcatttgcagtgatgacactgcctattctgatggcaaaggaaatcctgat
acaggagataacttcagaggtgcccctgatattgaccacctcaatcctagagttcagaag
gagttatcagattggatgaactggttaaagtctgaaataggatttgatggatggcgattc
gactttgttaggggctatgctcctagtatcaccaaaatttatatggaaaatacttcacca
gattttgcagttggtgaaaaatgggactctcttgcttatggccaggatggaaagcctgac
tataaccaggatgcgcaccgtggtggactaaaagattggattcaagcagctggtggtgct
gtcacagcatttgattttacaacaaaagggatacttcaagctgctgtgcaaggagagcta
tggaggttgaaggactcaaatggaaagccaccaggattgattggcctgttgccacaaaat
gctgtgactttcattgacaatcatgacaccgggtctactcaaaagctttggccatttcca
tcagataaagtcatgcagggatatgcctacattctcactcatcctgggaccccatccatt
ttttatgatcacttttttgactggggcctaaaggaagaaattggcaaattggcaacaatt
aggaaaacttctgggattggttctgcaagcactgtgaatattttagcctctgatgctgat
ctttatgtggcagcaatcgatggtaacatgatcatgaagattggacctaagatggatctt
ggaaaccttattccctcaaacttccaggttgctacatcgggagcagattattgtgtgtgg
gtaaaa

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