KEGG   Populus trichocarpa (black cottonwood): POPTR_0002s14640gHelp
Entry
POPTR_0002s14640g CDS       T01077                                 

Gene name
POPTRDRAFT_552027
Definition
putative pectin methylesterase LuPME1 family protein
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Module
Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    POPTR_0002s14640g (POPTRDRAFT_552027)
   00500 Starch and sucrose metabolism
    POPTR_0002s14640g (POPTRDRAFT_552027)
Enzymes [BR:pop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     POPTR_0002s14640g (POPTRDRAFT_552027)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
LGII
AA seq 514 aa AA seqDB search
MAARIVLTYFLVPFLLSSTIVGYNSDEVMSWCSKTPNPQPCEYFLSHDHRNTPITHESDF
LKISMQLALDRAMQGKVNTYSLGSKCRNGLEKAAWEDCLELYEDSILWLTKTTSSKCTDY
DAQTWLSTALTNLETCRTGFTEFGMTDFILPLMSNNVSKLISNTLAINKVPYSEPSYKEG
FPSWVRPGDRKLLQSSSPASQANIVVATDGSGNVKTIKEAIDAASKRSGSGRYVIYVKAG
TYNENVEVGKKVKNVMFVGDGIGKTIVTGSKSAGGGTTTFKSATFAVVGDNFIARDMTFR
NTAGAKNHQAVALRSGSDFSVFYKCSFEGYQDTLYVYSQRQFYRECDIYGTVDFIFGNAA
VVFQNCNIYARSPPNKIITITAQGRTDPNQNTGISIHNCRVTAASDLKPVQGSVKTYLGR
PWKQYSRTVFMKTFLDSLINPAGWSPWNGNFALDTLYYGEYMNTGPGSSTANRVNWKGYR
VITSSTVASQFTVGSFISGNNWLPATNVPFTAGL
NT seq 1545 nt NT seq  +upstreamnt  +downstreamnt
atggctgctcggattgtgctaacgtattttcttgtgccttttctactctcctcaaccatt
gtggggtataattccgatgaggtaatgtcttggtgtagcaagacacctaacccacaacca
tgtgagtattttttaagccatgaccatagaaatacccccattacacatgagtccgatttt
ctcaaaatctctatgcaactagccttagaccgtgccatgcaaggtaaagtcaacacttat
tccctaggctcgaaatgtagaaatgggcttgaaaaggctgcatgggaagattgccttgag
ctctatgaagacagcattctttggctcaccaaaaccactagcagcaagtgcacagactat
gatgcacaaacatggctcagcacggctctaaccaacctagaaacgtgccgaaccgggttc
actgaattcgggatgactgactttattttgcctttgatgagtaataatgtgtccaagtta
attagcaacactttggctattaacaaggtaccatacagtgaacctagttacaaagaaggg
tttccttcctgggtcagacctggtgaccggaaactcttgcaatcatcttcaccagcttct
caggcaaacattgtggtggcaacagatgggtcagggaacgtcaagaccatcaaggaggcc
atagatgcggcatccaaaaggtcagggtcagggaggtatgtaatatatgtgaaagcaggg
acatacaatgaaaacgttgaggtgggaaaaaaggtgaagaatgttatgtttgttggtgac
ggtatagggaagacaattgtcaccggtagcaaaagcgctggaggaggtactacaactttc
aagtcagctacttttgccgtggtcggagataattttattgctcgggacatgacatttaga
aacacagctggtgccaagaatcaccaggcagttgccttgcgttcgggctccgatttctca
gtgttctacaagtgcagctttgaaggataccaggacactctctatgtctattctcagaga
caattctatagagaatgtgacatctatggtaccgttgacttcatatttggcaatgctgca
gttgttttccagaactgtaacatctatgctcgaagccctccaaacaagataattacgatt
actgctcaaggtagaactgaccctaaccaaaacacaggaatctcgattcacaactgtagg
gttactgctgcttccgatctaaagccggtccaaggctccgttaagacataccttggtagg
ccgtggaaacagtactcgaggactgtttttatgaaaaccttccttgatagcttgattaac
ccagctggttggtcgccatggaatggtaattttgctctcgatactctatattatggagaa
tacatgaatactggccctggatcatctactgccaatagagttaattggaaaggctaccgc
gtcatcactagttcaaccgtagcatcacaattcaccgtgggcagcttcatttccgggaat
aattggttgccggccaccaacgtaccattcaccgccggcctttaa

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