KEGG   Populus trichocarpa (black cottonwood): POPTR_0011s00480gHelp
Entry
POPTR_0011s00480g CDS       T01077                                 

Gene name
POPTRDRAFT_822767
Definition
pectin methylesterase family protein
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Module
Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    POPTR_0011s00480g (POPTRDRAFT_822767)
   00500 Starch and sucrose metabolism
    POPTR_0011s00480g (POPTRDRAFT_822767)
Enzymes [BR:pop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     POPTR_0011s00480g (POPTRDRAFT_822767)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
AA seq 549 aa AA seqDB search
MATMNTPLLATPKTSRRKTICLVLSMVAILSSTTLVTMRYYTKTDPSSPPGLLQNLCDHA
YDQESCLAMVSQIASNTSTKMSQVGLLQLLLGKSTPHIQNTIEKAEVIHSRINDAREQAA
LGDCVELMEISKYRIKDTIVALERVTSKSHANALTWLSSVLTNHDTCLDGLNGPARSTME
PDLNDLILRARTSLAILAAISPSKENNDIFSLKEDFPSWLPSMDRKLLVALPKDINADVT
VAKDGSGKYKTVKEAVASAPDNGKTRYVIYVKKGTYKENVEVGKKKKNVMLVGDGMDSTI
ITGSLNVVDGSTTFNSATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGADQSVINRCR
IDAYQDTLYTHSLRQFYRDSYITGTVDFIFGNAAVVLQNCKLVPRKPMSGQKNMVTAQGR
TDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDPAGWS
AWDGEFALKTLYYGEYLNQGAGAGTSKRVNWAGYHVITSANEAKKFTVAELIQGGVWLKS
TGVSYTEGL
NT seq 1650 nt NT seq  +upstreamnt  +downstreamnt
atggcaacaatgaatactcctctattagccacccccaaaacctctcgtcgcaaaactata
tgtctagttctctccatggttgcaatcttaagctcaaccacactagttaccatgcgctat
tacacaaaaactgacccctcttcccctcctggcctattgcaaaacttatgtgaccatgcc
tatgaccaagaatcatgcctagccatggtctcacaaatagcttcaaacacatccactaaa
atgagccaagtcggtctacttcagctcttgctaggaaaatccacaccccacatacaaaat
actattgaaaaggccgaggttattcacagtcggatcaatgatgcgagagaacaagcggcc
ctaggagattgtgtggagctgatggagatctccaagtacagaatcaaggacacaatagtt
gctcttgaaagagttacatccaaatcccatgcaaatgctcttacgtggcttagcagtgtc
ctcaccaaccatgatacatgcttagatgggctaaatggtccagccaggtccacaatggag
ccagacctcaatgacctgatattgagagcgagaacttctctagccatactagctgcaatt
tcaccctcgaaagaaaataatgacatcttttcattgaaagaagattttccatcatggcta
cctagtatggatagaaagcttctagttgctctgccaaaggacatcaacgctgatgttaca
gtggctaaagatgggagtggtaagtacaagactgtgaaagaggctgtggcatcagcacca
gataatggcaagaccaggtatgttatttatgtgaagaaggggacatataaggagaatgtt
gaagtgggaaagaaaaagaagaacgtgatgcttgttggtgatggcatggattccactatc
attactggtagtttgaatgttgttgatgggtctacaacattcaactctgccactgtagct
gctgttggtgatggattcatagcccaggacatttggttccaaaacaccgctggcccagag
aagcatcaagcggtggccctccgcgtcggagctgatcaatcagtgattaaccgatgccgc
attgatgcctatcaagacaccctctatacccacagcctccggcaattctacagagatagc
tatattactggcacagtggacttcatcttcggcaatgctgctgtggtgctccaaaactgc
aagcttgtaccacgaaagcccatgagtggacaaaagaacatggtaacagcccaaggaaga
actgacccaaaccaaaacactgggacatcaatccagaaatgtgacattatagcaagctct
gatcttacgcctgttaagagctcattcaaatcattcttgggccgtccatggaaggagtac
tcaaggactgttgtaatgcagtccaatattggtgaccttattgatccagctgggtggtca
gcgtgggatggggagtttgccctaaagactttgtattatggtgagtatttgaaccaggga
gcaggtgctggtactagtaaaagagtgaattgggcaggttatcatgtcattactagtgct
aatgaggccaagaaattcacggtggctgagttgatacaaggaggggtttggttgaagtct
actggagtttcttatacagaagggctgtga

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