KEGG   Populus trichocarpa (black cottonwood): POPTR_0014s06260gHelp
Entry
POPTR_0014s06260g CDS       T01077                                 

Gene name
POPTRDRAFT_572081
Definition
putative pectin methylesterase LuPME1 family protein
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Module
Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    POPTR_0014s06260g (POPTRDRAFT_572081)
   00500 Starch and sucrose metabolism
    POPTR_0014s06260g (POPTRDRAFT_572081)
Enzymes [BR:pop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     POPTR_0014s06260g (POPTRDRAFT_572081)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
AA seq 514 aa AA seqDB search
MAIRIMLTFLFVSFLLSPTILGYNHDEVKSWCSKTPNPQPCEYFLSHNPKNTPIQHESDF
LKISIELALDRAMHGKVNTYSLGSKCRNGLEKAAWEDCLELYQEIVLWLNKTTGSKCTKY
DAQTWLSTALTNLETCRTGFAEFGMTDYILPMMSNNVSKLISNTLAINKAPYSEPSFNGG
FPSWVRPGDRKLLQSSSPASQANIVVAQDGSGNVKTIKEAIVAASKRSGSGRYVIYVKAG
TYNENVEVGQKVKNVMVVGDGIGKTIVTGSKSVGGGTTTFKSATFAVVGDNFIARDMTFR
NTAGAKNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSQRQFYRECNIYGTVDFIFGNAA
VVFQNCNIYARNPPNKTNTITAQGRTDPNQNTGISIHNCKVTAASDLKSVQSSVKTYLGR
PWQKYSRTVFMKTDLDSLINSAGWMPWSGNFALDTLYYGEYMNTGPGSSTANRVNWKGYH
VITSASVASQFTVASFISGNNWLPATNVPFTAGL
NT seq 1545 nt NT seq  +upstreamnt  +downstreamnt
atggctattcgaattatgctgacatttctattcgtgtctttccttctctccccgaccatt
ttggggtacaatcacgatgaggtaaagtcttggtgtagcaaaacacctaatccacaacca
tgtgagtattttttaagccataacccaaaaaatacccccattcaacatgagtccgatttt
ctcaaaatttctattgaactagccttggaccgtgccatgcatggtaaagtcaatacgtac
tccctaggctcaaaatgtagaaatgggcttgaaaaagctgcatgggaagattgccttgag
ctctatcaagagatcgttctttggctcaacaaaactactggcagcaagtgcacaaaatat
gatgcacaaacatggctcagcacggctctaaccaacctagaaacgtgcagaaccgggttc
gctgaattcgggatgactgactatattttgcctatgatgagtaataatgtgtccaagtta
atcagcaatactttggctattaacaaggcaccatatagcgaacctagtttcaatggtggg
ttcccttcatgggtcagacctggcgaccggaaactcttgcaatcatcttcaccagcttct
caggcaaacattgtggtggcacaagatgggtcagggaacgtcaagaccattaaggaggcc
atagttgcggcatcgaaaagatcagggtcagggaggtatgtgatatatgtgaaggcaggg
acatacaacgaaaacgttgaggtaggacaaaaggtgaagaatgttatggtggtaggtgat
ggtatagggaagacaatcgtcaccggtagcaaaagcgtcggaggaggcactacaactttc
aagtcagccacttttgccgtggttggagataattttattgctcgagacatgacatttaga
aacacagccggcgctaaaaatcatcaggcagttgccttacgttccggctccgatttatcg
gtgttctacaagtgcagcttcgaaggataccaagacaccctctatgtccattctcagaga
cagttctatagagaatgtaacatttatggcactgttgacttcatattcggcaacgctgca
gttgtttttcaaaattgtaacatctatgcacgaaaccctcctaacaagaccaataccatt
accgcccaggggaggacagaccctaaccaaaacaccggaatttcaattcacaattgtaag
gtaactgctgcttccgacttaaagtcagtccaaagctccgttaaaacatacctcggcagg
ccatggcaaaaatactcaaggactgttttcatgaaaacagaccttgatagcttgattaac
tcagctggttggatgccatggagtggtaattttgctcttgatactttatattatggagaa
tacatgaatactggccctggatcatctactgccaatagagttaactggaaaggctaccac
gttatcactagtgcatccgtggcatcacaattcactgtggccagcttcatttcgggaaat
aattggttgccggccaccaacgtgccattcaccgccggcctttaa

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