KEGG   Populus trichocarpa (black cottonwood): POPTR_0014s12180gHelp
Entry
POPTR_0014s12180g CDS       T01077                                 

Gene name
POPTRDRAFT_572672
Definition
pectinesterase family protein
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Module
Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    POPTR_0014s12180g (POPTRDRAFT_572672)
   00500 Starch and sucrose metabolism
    POPTR_0014s12180g (POPTRDRAFT_572672)
Enzymes [BR:pop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     POPTR_0014s12180g (POPTRDRAFT_572672)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
AA seq 560 aa AA seqDB search
MTPSKLISLVALAVVFLPFLASPSLADVPSSDPVSPGTLCKDTPDPSFCKSVLPVQSTNV
YDSARLCVRKSLSQSRKFLNLVNEYLSRRSTLSVAAIRALEDCQFLANLNMEFLLSSFQT
VNATSKTLPSLQADNVQTLLSAILTNQQTCLDGLQATSSASSVSNDLSVPLSNDTKLYSV
SLAFFTEGWVPKKKRGSTWQPKSKQFAFRHGRLPMKMSARTRAIYESVSTRKLLQTVNND
IEVSDIVTVSQDGQGNFTTINDAVAAAPNNTDGSNGYFMIYVTAGIYEEYVSIAKNKKYL
MMVGDGINQTVITGNRSVVDGWTTFNSATFAVVAPNFVAVNITFRNTAGAVKHQAVAVRS
GADLSAFYGCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPMS
GQFNAITAQGRTDPNQNTGTSIHNCNIKAADDLASSNATVQTYLGRPWKQYSRTVYMQSF
MDGLINPAGWQIWSGDFALNTSYYAEYNNTGPGSDTTNRVTWPGFHVINATDAVNFTVSS
FLLGNDWLPQTAVPFSSGLI
NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt
atgacgccttctaagctcatctctctggtagcgttggctgttgtttttcttcccttcctt
gcctctccatctttagcagatgtaccaagtagtgatcctgtcagccctggaaccctttgc
aaggacaccccagacccttccttttgcaaatctgttctccctgtccaatctaccaatgtc
tatgactctgcccgactttgcgtccgaaagtctctatcacaatcccgtaaatttttgaac
ctagttaatgaatatctctcacgccgctccactttgtccgtcgctgcaattcgggctctt
gaggattgtcagtttctagctaatctaaacatggagtttttgttgagctcctttcaaact
gtcaatgctactagtaaaaccttgccttctttgcaagctgataatgtgcaaactttgcta
agtgccattttaacgaaccagcaaacctgtttagatggcctacaggccacatcttctgct
tcgagtgtaagtaacgatctctcagtccctttgtctaatgacacaaaactttatagtgtt
tctctagcttttttcaccgaaggttgggttcctaaaaagaagagagggagcacatggcag
cctaaaagcaagcagtttgcattcagacatggacgattgccaatgaaaatgtctgccagg
acccgtgcaatttacgagtcagtgagcacaagaaaacttctccagacagtgaataacgat
atagaggtcagtgatatagtgacggtgagtcaggacggacaaggaaatttcacaaccatc
aatgatgctgtcgctgcagctccaaataataccgacggcagtaatggctacttcatgatt
tatgtcactgcaggcatttatgaagagtatgtgtctattgcaaagaacaagaaatatttg
atgatggttggagatggtataaatcaaacggtgattactgggaatcgtagtgttgttgat
gggtggactactttcaattctgctacatttgctgtggtggcacccaactttgttgcagtg
aacatcacattccgtaacacagctggggcagtcaagcatcaggctgtagctgttcgaagt
ggagctgatttgtctgcattttatggttgcagttttgaagggtaccaggataccttatac
acccattctctgagacaattctacagggagtgtgatatctatggtactgttgattttata
tttggcaatgctgctgttgttttacaaaactgtaacttgtatccacggctgcctatgagt
ggtcaattcaatgccatcactgcccaaggtagaacagatccgaaccaaaacactggcaca
tctatacataattgtaatattaaagctgctgacgatttggcttcaagcaatgcaacggta
caaacatatcttgggaggccatggaagcagtattcaagaactgtttatatgcaaagtttc
atggatggactgataaatcctgctggttggcaaatatggagtggagatttcgcactaaac
acatcatattatgcagaatacaacaacaccggaccgggttctgacactacaaacagggta
acatggcctggtttccacgttattaacgctactgatgctgttaatttcaccgtgtctagc
ttcttgctggggaatgattggctacctcaaacagccgttcccttctctagtggcctgata
tga

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