KEGG   Populus trichocarpa (black cottonwood): POPTR_0015s14740gHelp
Entry
POPTR_0015s14740g CDS       T01077                                 

Gene name
POPTRDRAFT_575664
Definition
putative pectin methylesterase family protein
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Module
Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    POPTR_0015s14740g (POPTRDRAFT_575664)
   00500 Starch and sucrose metabolism
    POPTR_0015s14740g (POPTRDRAFT_575664)
Enzymes [BR:pop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     POPTR_0015s14740g (POPTRDRAFT_575664)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
LGXV
AA seq 517 aa AA seqDB search
MATKLCLSLLFMCLCSLLSSSIASNDQIDYWCSKTPNPEPCKYFMKQNPKHFVPKQKSDF
RKMAIELAVQRALNAQNHNKWLGPKCRNEKEKAAWADCLKLYEDTIAELNHTIDSNTKCT
QFDAQTWLSTALTNLETCKAGFKDLGVSDFVLPLMSNNVSKLIRNTLALKDNASSTLPQT
YKDGFPSWVKAGDRKLLQTSSPSPNLVVAQDGSGNHRTIKAALDAAAKRSGSRRFVIRIK
SGVYRENLDIGKKLKNIMLVGDGLRNTIITGSRSVGGGFTTFNSATVAVTGEGFIARGIT
FRNTAGPQNHQAVALRSGSDLSVFYRCGFEGYQDTLYVHSQRQFYKECYIYGTVDFIFGN
AAVILQNCMIYARRPMDKQKNVVTAQGRTDPNQNTGISIHNSRVMASSDLRPVLSSFKTY
LGRPWKEYSRTVFLQTYLDSLVDPAGWLEWDGNFALNTLYYGEYRNSGPGASTRGRVKWR
GYRVITSSTEASRFTVANFIAGRSWLPATGVPFYPGL
NT seq 1554 nt NT seq  +upstreamnt  +downstreamnt
atggccacaaagctttgtttatctcttttgttcatgtgcttatgctcattgctttcatca
tctattgcctctaatgaccagatagattactggtgcagcaaaaccccaaaccctgaacca
tgcaaatactttatgaagcaaaacccaaaacactttgtgccgaaacaaaagtctgacttc
cgcaaaatggcaatcgaattagccgtgcaacgggctctcaatgctcaaaatcacaacaaa
tggctaggaccaaaatgccgcaatgagaaagaaaaggctgcgtgggctgactgcttaaag
ctctatgaggacactattgcagaactcaaccacaccattgactccaacacaaaatgcacc
cagtttgatgctcaaacttggcttagcactgctttaacaaaccttgaaacctgcaaagcc
gggttcaaggatcttggggtttcagatttcgtgttacctctcatgtctaacaatgtttca
aagctaattcgcaacaccttggctttgaaggacaatgcctcatcaactttaccccaaact
tataaagatggtttccctagttgggttaaagcaggtgatagaaagctcttgcaaacatct
tcaccatctccaaatcttgtggtggctcaagatggttcagggaaccaccgtaccataaag
gcagcccttgacgcagccgcaaagaggagtggtagtaggaggtttgttattcgtattaag
agtggggtttatagagaaaatcttgatattggaaagaagttaaagaacattatgcttgtt
ggtgatggcttgagaaataccatcatcaccgggagccgaagtgttggtggaggttttact
actttcaactctgcaactgttgccgtgactggggaaggattcattgctcgaggcatcact
ttccgcaacacagctggtccacaaaaccaccaagctgtggccctccgatcaggctccgac
ctctcagtcttctaccgttgtggcttcgaaggttaccaagacaccttgtacgtccactcc
caaaggcaattctacaaggaatgctacatctatggcacagtcgatttcatttttgggaat
gcagctgtgatcttacaaaattgtatgatatatgcaagaaggcctatggataagcaaaag
aacgtcgtaacagctcaaggcaggactgaccctaatcaaaatactgggatttcaatccat
aactcgcgagtcatggcttcatcagaccttagaccagtgctaagctcattcaagacttac
ttaggacgcccctggaaggagtactctcgtacagtttttcttcaaacttatcttgattct
ttggtggatccagcaggttggttggagtgggatggtaacttcgctctaaacactttgtat
tatggagagtacagaaattctggtcctggagcctccactagaggaagagttaagtggcgt
ggttaccgggttataacaagctcaaccgaagcatcaagattcacagtcgcaaacttcata
gccggaaggtcatggttgccggctactggtgtcccattttaccctggactttga

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