KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_1067026

Entry

POPTR_1067026 CDS T01077

Definition

hypothetical protein

Orthology

K02358

elongation factor Tu

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop04626

Plant-pathogen interaction

Class

Organismal Systems; Environmental adaptation; Plant-pathogen interaction [PATH:pop04626]

SSDB

Motif

Pfam:

GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 Miro cobW DAP_epimerase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 483 aa
MAVSASATTFTSTNLIYPHHTTTTSSTSTPTFSLKPTSKLPSKSILSSSFLSPFTPTSPT
SPFTTTRHRTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGGSAPKK
YDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVV
SGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGD
DIPIISGSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDLPFLLAVE
DVFSITGRGTVATGRVERGTIRTGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVG
LLLRGVQKADIQRGMVLSKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTT
DVTGRVATIMNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQA
IIE

NT seq 1452 nt +upstreamnt +downstreamnt
atggctgtttccgcctcagcaaccactttcacctccacaaacctcatctacccccaccac
acaaccaccacatcctctacctccacccctactttctccctcaaacccacctccaaactc
ccctcaaaatccatcctttcctcttctttcctctcccccttcactcccacttccccaacc
tcccccttcaccaccacccgccaccgcaccttcactgtccgtgccgcgagagggaagttc
gaaagaaagaaaccccatgtcaacataggcaccataggccatgtagaccacggcaaaaca
actctcactgctgctctaaccatggctctagcctctatgggtggcagtgcgcccaaaaaa
tacgatgaaatcgatgctgcaccagaagaacgcgctagaggaatcacaattaacactgct
acagttgaatatgagacagaatctcgccattatgctcatgttgattgccctggtcatgcc
gattatgttaagaacatgattactggtgctgctcaaatggatggagctattttggttgtg
tctggcgccgatggtccaatgccacaaacaaaagaacatatcttgttggcaaaacaagtt
ggggttccaaacatggttgtgtttttgaataaacaagatcaagttgatgatgaggagctg
ttgcaattggtagagttggaggtaagagaattgttgtctagttatgagtttcctggtgat
gatattccaattatctctggttctgctttgttagctttagaggctttgatggaaaatcct
gctattaagagaggagagaatcaatgggttgataaaatttacgaacttatggataacgtt
gataattatataccaattccacaaaggcaaactgatttgccatttttacttgctgtggag
gatgttttttctattaccggtcgtgggacagtagctactgggagggttgagagaggtaca
atcagaactggggataccgtagatattgtggggttaagggagactaggaatacaacagtt
actggtgtggaaatgtttcaaaagatattggatgaagcattggcaggtgataatgttggg
ttgttgttgagaggtgttcaaaaggctgatattcagagagggatggttttatcgaagcca
gggtcaattactccacatactaaatttgaggcgattgtttatgttttgaagaaggaagaa
ggtggcaggcattctcccttctttgctgggtataggcctcaattttatatgaggaccact
gatgttacagggagggtggctacgattatgaatgataaggatgaggagtcaaagatggtt
atgcctggggatcgtgtgaagatgatagtggaacttattatgcccgtggcttgtgagcaa
ggcatgaggtttgctatcagagaaggagggaagactgttggagctggtgttattcaggcc
attattgagtag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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