KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_1107225

Entry

POPTR_1107225 CDS T01077

Definition

hypothetical protein

Orthology

K11366

ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.1.2.15]

Organism

pop Populus trichocarpa (black cottonwood)

Class

SSDB

Motif

Pfam:

UCH UCH_1 zf-UBP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 566 aa
MSSKINHHHHINGHDSIPPPCPHLADFRSRNGTKPFHLLQNCLRIKPPHGRASIRRDPSE
IPRCGACAVSSVPRIYACVTCATISCHAPPEPSHAAAHAASMAPGHEISVDVDRAELFCC
ACRDYVYDRDFDAAVVLSSKANNIHSNVNSDNLRKKRRIVEYRPWLPDIQERVLVNNNSS
VLNFVEDRPWGLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKKSGNEN
GGLRLCLACDMDAMFSAVFSGNPVPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDG
IHEKVEKDRHKTHDCCIAHRVFSGILRSDVMCTACGFTSTKYDPCVDISLDLEPYLGSSA
KSMSLKTHSCNGEADCTNSSQNGGISTLIGCLDRFTRPERLGSDQKFFCQQCQVRQESLK
QMSIRKLPLVSCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIF
PFDGDEADASNEMSSEFELFAVVTHTGKLDSGHYVTYLRLSNQWYKCDDSWITQVNENIV
RAAQGYMMFYVQKMLYYKAGEKQVAQ

NT seq 1701 nt +upstreamnt +downstreamnt
atgtcatcaaaaatcaatcaccaccaccatatcaacggccacgattctatccctccaccc
tgtccccacctcgccgatttccgttcccgtaacggcactaaacccttccacctcctccaa
aactgcctccgcatcaaaccacctcacggccgcgcctcgatccgtcgtgacccctcagag
atccctcgctgtggcgcgtgcgccgtgtcctctgtcccccgcatctacgcttgcgtaacc
tgcgctaccatctcctgccacgcgcctccggaaccctcccatgcggcggcgcacgccgcc
tccatggctcctggtcacgagatctccgtcgatgtcgaccgtgcagagcttttctgctgc
gcgtgtcgcgattatgtttacgatcgcgatttcgacgcggcggtggtgctgtcatctaag
gccaacaatattcatagcaatgttaatagcgataatctccgcaaaaaacggaggattgtt
gagtaccggccgtggcttccggatatccaggagcgcgtgctggtgaataacaattcgagt
gtgttgaattttgtagaggatcggccgtgggggttgagagggctgaataatttagggaac
acttgttttatgaattcagtgttgcaggcattgctgcatactccgcctttacggaattat
tttttgagtgataggcataatagatattattgtcaacaaaagaagagtggtaatgagaat
gggggtttgaggctgtgtctggcttgtgatatggatgctatgttttctgctgttttttcg
gggaatcccgtgccttatagtcccgccaagtttttgtacagttggtggcaacatgcagca
aacttagcaagttacgaacagcaggatgcgcatgagtttttcatttccatgcttgatggg
atccatgaaaaggtggagaaggatcgacacaagacccatgattgttgcattgcccacaga
gtattttctggaatcttgcgatctgatgtcatgtgcacagcttgtggtttcacatctact
aagtatgacccatgcgtggacatttctctggatttggaaccttacctggggagttctgca
aagtctatgtctttgaagactcattcttgcaatggtgaggcggattgcacgaattcaagc
caaaatggtgggatatcaacactaattgggtgcttggaccgatttactagacctgagaga
ttgggctctgaccagaaattcttctgccaacagtgtcaggtgaggcaggagtctctaaaa
cagatgtctataagaaagcttccactcgtttcatgctttcatatcaaaagatttgaacat
tcttccatacgtaaaatgtcaaggaaggttgaccgttatctgcaatttcctttttcattg
gacatggcaccttatctttcttcttctatcttgaggagtcgatttggaaataggatcttc
ccatttgacggagatgaagcagatgcttcaaatgaaatgtcatcagagtttgagctgttt
gctgtggtcactcacacaggtaaacttgattctggtcactatgtgacttatttgcgctta
agtaatcagtggtacaagtgtgatgattcttggatcactcaagtcaatgagaacattgtg
agggctgcgcaagggtacatgatgttttatgtacagaagatgctctattacaaagctggc
gagaaacaagttgcccagtga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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