KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_204417

Entry

POPTR_204417 CDS T01077

Definition

hypothetical protein

Organism

pop Populus trichocarpa (black cottonwood)

Class

SSDB

Motif

Pfam:

VWA Vwaint VWA_3 VWA_2 VWA_CoxE zf-RING_2 zf-rbx1 zf-C3HC4 zf-Apc11 zf-C3HC4_2 zf-C3HC4_3 zf-RING_4 zf-UDP zf-RING_5 DUF2201 PHD zf-HC5HC2H zf-HC5HC2H_2 zf-RING-like

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 688 aa
MGSKWRKAKLALGLNMCLYVPPTDVEQRDSSSSPSPARLFSRSSHGSTTPTPSSSGLRLS
TSPDSNNKRTCAICLTAMKTGQGQAIFMAECSHSFHFHCIASNVKHGNQICPVCRAKWKE
IPFQRSVSDVTCGKPRMSALGWPQDDAWMTVLRRLPPARTDANRHISSHYQANEPAIFDD
DEDLDPQHETAEGNTSTQDAGDVNSVRTVEVFTYTEVSAVPKSVSYDNFTILIHLKAPLT
SGRQNRNWNHAESPQSSQDSRAPVDLVTVLDVSGSMSGTKLALLKRAMGFVIQNLGPSDR
LSVIAFSSTARRHFPLRRMTETGKLEALQAVNSLVSSGGTNIAEGLRKGFKVVVDRKWKN
PVCSIILLSDGQDTYTISGTSMTRPQADYKSLLPTSIHRNGSSGFRIPVHAFGFGSDHDA
ASMHSISEISGGTFSFIEAEGVIQDAFAQCIGGLLSVVVQELQVKVESLHPRLEIGSIQA
GSYKSSIMANAIMGFVDVGDLYAEEERDFLVTVNIPVDGTSDEMSLLKVSCTYRDPMTKG
MMTLEEASQVKIQRPEITGTRVVSMEVEKQRNRLRAAEAMAEARAAAENGDLARAVSVLE
SCGKALSETASTRAGDRLCIALCAELKEMQERMASRRVYETSGRAYILSGLSSHSWQRAT
ARGDSTDSTNLMQAYQTPSMADMVTQSQ

NT seq 2064 nt +upstreamnt +downstreamnt
atgggaagcaaatggagaaaggcaaaattagctcttggcctgaacatgtgtctttatgtc
cctccgactgatgttgaacaacgtgattcttcctcctcaccttctcctgctagactattc
tcccgctcctctcacgggtccactactcctaccccttcttcttccggcctccgcttgtcc
acatcccccgatagcaacaataagaggacctgtgcaatatgcctgactgccatgaaaacg
ggacagggccaagccatttttatggcagaatgctcccactccttccacttccattgcatt
gcctctaatgtaaagcatgggaaccagatttgtccagtttgccgagcaaagtggaaagaa
atcccctttcaaagatctgtttctgatgttacttgtggaaagccaagaatgagcgcacta
ggttggccccaagatgatgcttggatgactgttctaagacggcttcctccagctcgaaca
gatgcaaacaggcatatttcatcacattatcaagccaatgaaccagctatctttgatgat
gatgaagacttggatccgcaacacgagactgccgagggaaacacatccactcaagatgct
ggtgatgttaattctgtgagaactgtagaggttttcacatatacagaagtttcagcagtt
ccaaaatcagtctcttatgataatttcaccatactaatccatctcaaggcccctcttaca
agtggaagacagaataggaactggaatcatgctgaatcaccacaatcatctcaagattct
cgtgctccggttgatctcgttaccgtgcttgatgttagtggcagcatgtctggtacaaag
cttgctttgctaaaacgagctatggggtttgtgatccagaatctgggtccatctgaccga
ctgtctgttattgccttctcatccacagcccgacgccactttcctcttcgtcgcatgaca
gagaccggaaagctcgaggccttacaggctgttaattctctggtttctagtggtgggaca
aacattgctgaaggtctaaggaaaggtttcaaggtggtggttgatcgcaaatggaagaat
ccagtttgtagcatcatactattatctgatgggcaggatacatatactatctctggcaca
agcatgacccgtcctcaagcagattacaaatctcttctcccgacatcaattcaccggaat
ggtagctcggggttccgtattcctgtgcatgcatttgggtttggttcagaccatgatgct
gcatcaatgcattcaatttctgagatttcaggtggcacattttcattcatagaagctgag
ggtgtaattcaggatgcatttgcacagtgcataggagggctattgagtgtggtggtgcaa
gagctacaggtcaaagttgagtctcttcatccaagattggaaattggttcaattcaagca
ggtagttacaaaagcagcatcatggccaatgcaattatgggctttgttgatgttggagac
ttgtacgccgaagaagaaagggatttcttggtaacagtcaatattccagttgatggtacc
agtgatgagatgtcattgctaaaggtcagttgtacttacagagatcctatgacaaaaggt
atgatgactcttgaggaagctagccaagtaaagatccaaaggcccgaaataaccggaaca
cgagtggtgtcaatggaagtagagaagcaacgaaacagactccgtgcagcggaggcaatg
gctgaggctagagctgcagctgaaaatggtgatctagctcgtgcggtctctgtcctggag
agctgtggcaaagcattgtcagaaactgcatctactcgggcaggtgacagactgtgtatt
gcactgtgcgcggagttgaaggagatgcaagaacggatggcaagccggcgggtatatgaa
acatctggaagggcttacattctatcaggtttgagctcacactcatggcaaagagcaact
gcgcgaggtgattccactgacagtacaaacctcatgcaagcttaccagacgccatcaatg
gcggacatggtaacccagtctcag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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