KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_249183

Entry

POPTR_249183 CDS T01077

Definition

alpha-galactosidase

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00052	Galactose metabolism
pop00561	Glycerolipid metabolism
pop00600	Sphingolipid metabolism
pop00603	Glycosphingolipid biosynthesis - globo series

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:pop00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:pop00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:pop00600]
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - globo series [PATH:pop00603]

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_97 Raffinose_syn

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 380 aa
SFNNVFSTSNYGIFQLNNGLARTPQMGWNSWNFFACNINETVIKETADALISTGLAELGY
VYVNIDDCWSSTKRDSKGQLIPDPKTFPSGIKALADYVHEKGLKLGIYSDAGAFTCQVRP
GSLLHEKDDAELFASWGVDYLKYDNCFNLGINPKERYPPMRDALNSTGRTVFYSLCEWGV
DDPALWAGKVGNSWRTTDDINDSWASMTTTADLNDKWASYAGPGGWNDPDMLEVGNGGMT
YHEYRAHFSIWALMKAPLLIGCDVRNMTAETIEILTNKEIIAVNQDPLGIQGRKVYSTGT
DGCLQVWAGPLSGHRIVVALWNRCSKAATITAGWGALGLESSTSVSVRDLWQGKDIVGDA
VASFGARVDAHDCLIFIFTP

NT seq 1140 nt +upstreamnt +downstreamnt
tcattcaataacgttttttctacttcaaattatgggattttccagctcaataatggattg
gctagaactcctcagatgggatggaatagctggaatttctttgcctgcaatatcaatgaa
accgtcatcaaggaaacagctgatgcacttatttcaaccggcttggctgagttgggttat
gtgtatgtcaacatagatgattgctggtcttccacaaaacgagattcaaagggtcaactg
atccctgatccaaaaacctttccatcgggaattaaagctcttgctgattatgttcatgag
aagggcctcaagcttggcatttattctgatgctggggcttttacatgtcaagttcgaccg
ggatcgcttctccatgaaaaagatgatgcagaactttttgcttcttggggtgtagattat
ttgaagtatgacaactgtttcaatttgggcatcaatccaaaagaaagatatccacctatg
cgtgatgctctaaactcaactggacgcacagttttttattcactttgtgaatggggagta
gatgaccctgcattatgggctggtaaagttggaaatagttggcgtacaacagatgacatc
aatgattcatgggcaagcatgactaccacagccgatctgaatgataaatgggcatcctat
gctggacctggtggatggaatgatcctgatatgttggaagttggcaatggtggtatgact
taccatgagtatcgtgctcatttcagcatctgggccttaatgaaggccccccttttgatt
ggttgtgatgtaagaaacatgactgcagaaactattgaaattctaaccaacaaggagatc
attgctgtaaatcaagatccgctagggattcagggaaggaaggtttattctaccggaact
gatggttgcctacaggtctgggcaggtcctttgtctggccatcgcatagttgttgctctc
tggaatcgatgttcaaaagctgcaactatcaccgctggatggggtgcacttgggctcgaa
tccagcactagtgtcagtgtaagagacctgtggcagggcaaagatatcgtgggagatgca
gtggcgtcatttggtgcccgagtcgatgctcatgattgcctaatatttatttttactccg

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

Download RDF

DBGET integrated database retrieval system