KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_551649

Entry

POPTR_551649 CDS T01077

Definition

hypothetical protein

Orthology

K11855

ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15]

Organism

pop Populus trichocarpa (black cottonwood)

Class

SSDB

Motif

Pfam:

UCH UCH_1 zf-MYND

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 1095 aa
MVLAAEEAARAEFEATVSYSTVPVSYGTVPVSKNNYQCVVCFCPRTTRCSRCKAVRYCSG
KCQIIHWRQGHKEECRRPPTTYHINDDGGNPGQRAAKQDQHDIYDGRYEKRPIETFSVEP
VVSDSSYSPGVSLLKDDDIIVDSVLDTEGADSISESPGTSFSGFSTPTGSSFSGFSAHSN
GESSDSVSVSESISSNETEGSDRQTPADIAPDTLESSVNEVATTKPSSPKFATLVDSIGS
FNKLSKSNHGNDRESQCSSSSSSHSISAGNDETITKPAKVSSGFWWRTLDSVGPSSDAGD
GSALSNFNGPGNSKSSNDKPSLLFKSNLSGSDALISHAKSSKVNNIISDDAPPSVPGVSR
PADGAVSPEKNGFDALKVKRSPTISFERSNLVDNNSGGGSNVSIESKSVSSSSPYAHVSF
SSGGVKLDPSASKVCRSQALRSERSNVVVDDIVDTSHLSKYRLSSSASQTHLNSSVGGHS
VSSVKLGGKVENVEPGAAATSQISSYSPSSINGLKSSVWKVVDQFRGPKCGRYSNKGLFP
YDLFVKLYTSNKVEMRPCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACVKKER
CFSCEFEKVILKAKEGKSPLSPIGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCL
KEARVNAVDSFEEEATLIGLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEIEGDIGKLE
DALRRFTGTEILDGDNKYQCGRCRSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKS
IRFPEILDLAPYMSGTSDKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDS
TVTAVELERVLSKGAYMLLYARCSPRAPRLIRSRIISSDPKNKCSPSKIKATNTALNSRS
MSMQSSVQSHPDSIPSDNLASVESFYLKLHRLLRISEEDSSSDNFSFTSGNSDEASCSTD
STHDSTSTDDLSDYIFGSWNSWRNTSDSDTSSSSSPLYSRYSPHADKNQNDSHAYSRIGG
PDLSDRIPSGGRKLVDLEGKRGNSFLHPDTTEQCRKLPSSNSCRDKVSTKLGSLNPLNDV
KSGVSFRRSVSERPD

NT seq 3288 nt +upstreamnt +downstreamnt
atggttttagcggcagaggaagccgccagggccgagtttgaggccacggtttcgtacagc
accgttccggtttcgtacggcaccgttccggtttcaaaaaataattaccagtgtgttgtt
tgtttttgcccgagaacgacacggtgttcccgctgtaaagctgttagatattgttctggt
aagtgtcaaattatccactggcgacaaggtcacaaggaagaatgtcgtcgtcctcccacc
acataccacattaatgatgatggaggcaatcctggccagagggcggcaaagcaagaccaa
catgatatttatgatggcagatatgagaaaagaccaattgaaacattctccgtggaacct
gtggtgtctgattccagttactctcctggagtttcactcttaaaggatgatgatattata
gttgattctgttttagacacagagggagcagattctatttctgaatcaccaggcacctca
ttttctggattttccactcctacgggctcttcattttctggattctctgctcattcaaat
ggggaatcatctgacagtgtttctgtaagtgagagcattagttcaaatgaaacagaggga
tcagacagacaaacaccggctgatattgcccctgatacactggagtccagtgtgaacgag
gtggctacgaccaaaccatcatctccaaagtttgctactttggttgattctataggtagt
tttaataaattgagtaaatcaaatcatggcaatgacagggagagtcaatgctcatctagt
tcttcaagccatagcataagtgccgggaatgatgaaacaatcacaaaaccagcaaaggtt
tcttctggtttctggtggagaactctggattctgttgggcccagcagtgatgctggggat
ggatctgctctgtcaaatttcaatggccctggtaacagcaagtcatctaatgacaaacca
tccctacttttcaagtccaatctatctggaagtgatgctctcatttcgcatgcaaaaagc
tcaaaggtgaacaacatcatatcggatgatgcacccccttctgttcctggcgtcagtagg
cctgctgatggagcagtttcaccagaaaagaatggctttgatgctctaaaagtcaagaga
tccccaaccataagttttgaaaggtccaatcttgttgataataactctggtggaggttca
aatgtttccattgagagtaaatctgtatcatcgtcctctccttatgcacatgtttctttc
agttccggaggagttaaattagatccaagtgcttcaaaagtatgcagatctcaagctttg
agatctgaaaggtcaaatgttgttgttgatgacattgttgatacttcacatctatctaag
tacagattatcatctagtgcttctcaaacccatttgaattctagtgtcggtgggcattca
gtttcaagtgtgaaacttggaggaaaagttgaaaatgttgaaccaggtgctgctgctact
tctcaaatttctagctattctccaagttctattaatggattgaagtcatcagtgtggaaa
gttgttgaccaattcagaggacctaaatgtgggagatatagcaataagggccttttccca
tacgatttatttgtgaagttatacacttcaaataaggtggaaatgcgaccatgtggcctt
atcaattgtggaaacagctgctatgctaatgctgttctacaatgcttggcatttactcct
cctttgacttcttattttgtgcaagggctccactctaaagcctgtgtaaaaaaagaacgg
tgcttctcttgtgagtttgaaaaagtaattttaaaggcaaaggaagggaaatctccgctt
tctcccattggcatactatcccaattacaaaatattgggagtcagcttggtaatggaaga
gaagaagatgcacatgaattcctgaggtatgcaattgatgcaatgcaatctgtttgcctt
aaggaagctagggtgaatgcagtagattcctttgaagaagaagccactctcataggcctt
acatttggaggctaccttcgctcaaagattaaatgcatgaagtgccattacaagtcagag
tggcaggaaagaatgatggatcttactgttgaaatagagggggatatagggaagcttgaa
gatgcacttagacgattcacgggtaccgagattctggatggggacaacaagtaccagtgt
ggcaggtgcagatcttatgagaaggctaagaaaaagttgacaatattggaggctcctaat
gtccttacaattgcattgaagcgctttcagtcaggtaaatttggaaagctcaataaatct
attcggttcccggagatcctggacttagcaccgtatatgagtggaactagtgataaatca
cccatatataggctttatggagtgattgttcacttggatgtcatgaatgctgcattttct
ggtcactatgtctgctatgtcaaaaacatccagaacaagtggttcaaaattgatgacagc
acagttacagctgtggaacttgaaagggttttatcaaaaggcgcttacatgcttctttat
gcaaggtgctcaccgagggccccaagactgataaggagcagaataatatcttctgatcca
aaaaataaatgcagtccctccaaaatcaaggcaacaaacactgcattgaattcaagatcc
atgtctatgcaatccagtgttcaatcgcatccagattcaattccttcggacaatttggcc
agtgttgaatctttctatttgaagctccaccggcttctgaggatttcagaagaggactca
tcaagtgacaatttctcttttaccagtggcaattccgatgaagcttcctgcagtactgac
agcacccatgattctacaagtactgatgacctttctgattacatttttggaagttggaac
tcttggaggaacacatctgattcagacacttcttcatcttcctcccctttgtactcaagg
tattcaccccatgctgataagaaccagaatgattcgcatgcatattcaaggattgggggt
cctgatctttcggacaggataccaagcggggggaggaagctggtggatctggaaggtaag
aggggaaattcttttttgcatcctgacacgactgaacaatgtagaaagttaccaagtagt
aatagttgtagggataaggtgtcgacaaaattaggatcacttaaccctttaaatgatgta
aaatccggggtatcctttagaagatcagtaagcgaaagaccagactaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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