KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_572875

Entry

POPTR_572875 CDS T01077

Gene name

CHS1

Definition

chalcone synthase (EC:2.3.1.74)

Orthology

K00660

chalcone synthase [EC:2.3.1.74]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00941	Flavonoid biosynthesis
pop01100	Metabolic pathways
pop01110	Biosynthesis of secondary metabolites
pop04712	Circadian rhythm - plant

Class

Metabolism; Biosynthesis of other secondary metabolites; Flavonoid biosynthesis [PATH:pop00941]
Organismal Systems; Environmental adaptation; Circadian rhythm - plant [PATH:pop04712]

SSDB

Motif

Pfam:

Chal_sti_synt_N Chal_sti_synt_C ACP_syn_III ACP_syn_III_C FAE1_CUT1_RppA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 396 aa
MAPSIEEIRKAQRASGPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRM
CDKSMIKKRYMHLTEEILKENSSMCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQ
PKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE
NNKGSRVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAAVIVGADPDTSIERPLFQI
VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIF
WIAHPGGPAILDQVEIKLDLKEEKLRATRNVLSDYGNMSSACVLFILDEMRNKSLEEGKS
TTGEGLEWGVLFGFGPGLTVETVVLHSVPVEQTIYS

NT seq 1191 nt +upstreamnt +downstreamnt
atggcaccgtcgattgaggagatcagaaaggcccagcgagccagtggtccagccaccatc
ctggccattggcaaggccaccccggccaactgtgtctcccaggctgactatcctgactac
tacttccggatcaccaacagtgaacacatgactgagttgaaggagaaattcaaacgcatg
tgtgacaaatctatgatcaagaaacggtacatgcacctaacggaggagatactgaaagag
aactctagcatgtgtgaatacatggctccgtctcttgatgcacgccaagacatggtggtt
gtggaggtgccaaagctaggaaaagaagcagcagctaaggctataaaagagtggggtcag
ccaaaatccaagatcacccaccttgtattctgtacaacctcaggtgtagacatgccaggt
gctgactaccagctcaccaagctcctcggcctgcgttcctccgtaaagagattcatgatg
tatcagcagggctgcttcgccggcgggaccgtccttcgcttagctaaggacttggctgag
aacaacaagggctcacgcgttcttgttgtctgctctgagatcactgctgtcacttttcgt
ggaccatctgatactcacttggattcaatggtaggtcaagcgctttttggcgatggtgct
gcagcagttattgtaggtgctgatcctgacacttccattgagcgtccattattccagatt
gtttcagccgcacaaaccatccttcctgactctgatggggccatcgatggacacttacgt
gaggttggtttaacctttcatctgctaaaggatgttcctgggctaatctcaaagaacata
gagaaaagcctggttgaagcattcgctccaattggtatcaacgattggaactccatattt
tggattgcacaccctggtggccccgcgattcttgaccaggttgagattaagctagatcta
aaggaagagaaactgagagctacaagaaacgtcctgagtgattatggcaacatgtcaagt
gcttgtgttttgtttatcttggacgagatgagaaacaagtctctcgaggaagggaaaagc
acaaccggtgaagggcttgagtggggtgttttgtttggattcggaccaggactcaccgtt
gagacagtggtgttacacagcgttccagtagaacaaacaatttactcatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (16)   
   KEGG COMPOUND (16)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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