KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_578303

Entry

POPTR_578303 CDS T01077

Definition

hypothetical protein

Orthology

K11366

ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.1.2.15]

Organism

pop Populus trichocarpa (black cottonwood)

Class

SSDB

Motif

Pfam:

UCH UCH_1 zf-UBP zf-DBF

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 478 aa
MSCSDHTLLHAQSENGHDIAVDIERSELYCCLCSDQVYDPDFDKVVVSKNIMDMPSKTHD
SVVDDLMRRSSKRRRLNPVVDLDLKRSKLLVSMMDRRAKSCYPLGLRGLNNLGSTCFMNS
VLQALLHAPPFRNYFLSERHDPETCKKRSSDQLCLACDFGVIFSAVYSGDRTPYSPAQFL
YSWWQHSANLASYEQQDAHEFFISVLDGIHEREGKERSSNKDNGGCQCIAHRVFSGMLRS
DVTCTTCGFTSTTYDPCVDISLNMDTTNFSTVNVANKSVREDTGRSTLLACLDLFTRPER
LGSDQKLYCQNCQEKRDSLKQMSIKRLPLVLSLHIKRFEHSSLRRSSRKIDWYLQFPFSL
DMTPYLSPSIVRNRFGNRVFGFESDKPDISSEFEIFAVVTHSGMLDSGHYVTYLRLQNQW
YKCDDAWITEVDERIVRAAQCYMIFYVQKMLYCKANEDWSCMPISTRRDPFVPIAGCC

NT seq 1437 nt +upstreamnt +downstreamnt
atgtcttgttcagaccacacccttttgcacgctcaatctgagaatggtcatgatatagct
gttgatattgaaagatcggaactttattgttgtttatgtagtgatcaggtctatgatcct
gattttgataaggttgtcgtgtctaaaaatattatggatatgccaagtaagacacatgat
agtgttgttgatgatttgatgaggagatcaagcaagaggaggaggttgaatccagtggtg
gatttggatttgaaaaggtccaaacttctggtttcaatgatggatcgaagggcgaaatcg
tgctatccgttgggattgagaggactgaacaatttggggagtacttgtttcatgaactct
gtgttgcaggcattgctacatgcaccaccattcaggaattacttcttgagtgagagacac
gaccccgaaacttgtaagaaaagatcatcagatcaattgtgtttggcttgtgattttggt
gttattttctcagctgtgtactcaggggatcggactccttatagtccagctcagttcctt
tacagttggtggcagcattcagcaaatctagctagttacgagcagcaggatgctcatgaa
ttcttcatttcagtgttagatggaatccatgagagagagggaaaggagaggagttcaaat
aaagataatggaggttgtcaatgtattgctcatagggttttctcagggatgttgagatct
gatgtgacctgcacaacttgtggatttacttccacaacttatgacccttgtgttgatatt
tcgctcaacatggacacaaccaacttctctacagtgaatgtggctaacaagtctgttaga
gaggacacaggcagatctacccttttggcttgtttggatctgttcacaaggcctgagagg
ttggggtctgaccagaaactgtactgccaaaattgtcaagaaaagagggactcgttgaaa
caaatgtctattaaaaggcttccattggtcttgtcgttacatatcaagcggttcgagcac
tcttccctgagaagatcgtcaagaaaaattgattggtacttgcagtttcctttttctttg
gacatgaccccatatttatcaccctcaattgtcagaaacaggtttggaaatagagttttt
gggtttgagagtgacaaaccagatatctcttcagaattcgagatttttgctgttgtcact
cattcagggatgctagactcaggtcattatgtcacttatctgcgcctacaaaaccaatgg
tacaagtgcgatgacgcgtggattactgaagttgatgagagaattgtgagagcagcacaa
tgctatatgattttctatgtgcagaagatgctttattgcaaagcaaatgaggattggagc
tgcatgccaatatccacaaggagggacccatttgttccaattgctggttgttgctaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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