KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_584163

Entry

POPTR_584163 CDS T01077

Definition

alanine transaminase (EC:2.6.1.2)

Orthology

K00814

alanine transaminase [EC:2.6.1.2]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00250	Alanine, aspartate and glutamate metabolism
pop00710	Carbon fixation in photosynthetic organisms
pop01100	Metabolic pathways
pop01210	2-Oxocarboxylic acid metabolism
pop01230	Biosynthesis of amino acids

Module

pop_M00171

C4-dicarboxylic acid cycle, NAD+ -malic enzyme type

Class

Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:pop00710]
Metabolism; Amino acid metabolism; Alanine, aspartate and glutamate metabolism [PATH:pop00250]

SSDB

Motif

Pfam:

Aminotran_1_2 Beta_elim_lyase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 481 aa
MARVSLDTINPKVLKCEYAVRGEIVTLAQAVQEELKSKPGSRPFDEILYCNIGNPQSLGQ
QPITFFREVLALCDHPSILDKSETRGLFSADAIERARQILDQIPGRATGAYSHSQGIKGL
RDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI
ALHGGTLVPYYLDEATGWGLEVSELKKQWADAKSKGITPRALVVINPGNPTGQVLAENNQ
KEIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVARSMGYGEKDISVVSFQSVSKGY
YGECGKRGGYMEVTGFGPEIREQIYKLASVNLCSNISGQILASLVMSPPKVGDESYESYS
AEKDGILSSLKRRAKTLEDAFNKLDGVTCNKAEGAMYLFPCIRLSEKAIKAAEAAKTTPD
NFYCRCLLNATGIVFVPGSGFRQVPGTWHFRCTILPQEDKIPAVVSRLTEFHKSFMEEFR
E

NT seq 1446 nt +upstreamnt +downstreamnt
atggctcgtgtttctcttgataccataaatcccaaggttttgaaatgcgaatatgctgtc
cgtggtgagattgtcacccttgcacaggcggtacaggaagagttgaagtctaagccaggc
tctcgtccctttgatgagatactttactgcaatattggaaatcctcagtctcttggtcag
cagcctattacctttttccgcgaggttcttgcattatgtgaccatccttccattctggac
aaaagtgaaactcggggtttgttcagtgctgatgccatagagagagctcggcagattctt
gatcaaattcctggaagggccactggtgcttatagtcacagtcagggaatcaaaggactg
cgtgatgcaattgctgctggaattgaagctcgcgatggctttcctgctgatccaaatgat
attttcttgacagatggtgcaagcccagcggtccacatgatgatgcagttactgatacga
tcagagaaggatggaatactttgtcccattcctcagtatcccttgtactctgcttcaatt
gctctccatggtggtactctggttccctactatcttgatgaagcaactggatggggcttg
gaagtttctgagctgaagaagcaatgggcagatgcaaagtccaagggaattactcctagg
gccttggttgtgataaatccaggcaacccaacagggcaggttcttgcagagaataatcag
aaagagatcgtggacttctgcaagaaagaaggtcttgttcttcttgcagacgaggtttat
caggaaaatgtttatgttcctgaaaagaagttccactcatttaagaaggttgctcgctct
atggggtatggtgaaaaagatatatctgtggtatcttttcagtctgtctctaaaggttac
tatggagagtgtggaaagagaggaggttacatggaagtcactgggtttggtcctgaaata
agggagcaaatatacaaacttgcatctgtgaatctatgctccaacatttctggtcaaatt
cttgcaagtcttgtcatgagcccacctaaggttggagatgaatcatatgaatcatactct
gcagagaaagatggaatcctctcttctttaaagagacgtgcaaagactctggaagacgca
ttcaataagctagacggtgtaacatgcaacaaagcagaaggagcaatgtatctcttcccc
tgcatccgcttgtctgaaaaggcaattaaagctgcagaagctgcaaaaacaactccggat
aacttctactgtcgctgcctactcaatgccacaggaattgtttttgttcctggctctggc
tttaggcaggttccgggcacctggcattttaggtgcaccatactgcctcaagaagataag
attccagctgttgtctcccgtctcacggagtttcacaagagtttcatggaggagtttcgc
gagtga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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