KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_719252

Entry

POPTR_719252 CDS T01077

Gene name

SDG910

Definition

SET domain protein

Orthology

K11430

enhancer of zeste [EC:2.1.1.43]

Organism

pop Populus trichocarpa (black cottonwood)

Class

SSDB

Motif

Pfam:

SET TCR

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 892 aa
MESDEETALTSKMVLSVIESLKKQVAADRCFYVMKRMEDNKQKLVGVTNHLYKLSKERKN
SWISDTDNSVDLFTKRQKDALSMHGGIDSSNVDKDSLGSEEDGNTSTAVLLGSSIPVKNA
VRPIKLPEVKRLPPYTSWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEEIID
EEEEKRDFLESEDYILRMTIKEAGLSDPVVESLAQCFSRSSSEVKVRFEVLKKEEKAVED
SKNKDNEAQTLNSFLDKDLEVALDSFDNLFCRRCLVFDCRLHGCSQDLIFPAEKQSPWSY
PDDNITCGPQCYKSVLKSERISSGISPERGFIEENSVCQSDGAGVPITSRKKSSAPSANR
RVKSCQSESASSNAKNISESSDSEIGPRQDTSPTSQLSPSKIKLVGKGGTCKRNSKRVAE
RVLSCMRKRQKKMVASDTDSVASGGLLSSDMKLRSTSHKGKEDASSSSHKNLKSPTTARS
RRKSEFHDGPSSEMVMDPPVPSSDDTFRKEEFIDKNTCKKELSDNRSWKAIEKSLFEKGV
EIFGGNSCLIARNLLNGLKTCWEVFQYITRSENRLACEAGDAGTLGEGYSKFDCSGTNEA
RRRSRFLRRRGRVRRLKYSWKSTAYHSIRKRITERKDQPCRQYNPCSCQAACGKQCTCLL
NGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTL
GIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHR
EADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPEPNCYAKVIMVAGDHRVG
IFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGGHSSGRAKKLA

NT seq 2679 nt +upstreamnt +downstreamnt
atggagtctgatgaagagacagctttaacaagcaaaatggttttatcagttattgaatca
ttaaagaagcaagttgcagctgaccgatgtttttatgttatgaaaaggatggaagacaac
aaacagaagttggttggtgttacgaaccacctctataagctgtcaaaggaaaggaagaac
agttggattagtgatactgacaatagtgtagatttatttacaaagaggcaaaaggatgca
ctcagtatgcatggtggtattgattcaagtaatgtagataaagatagtcttggctctgaa
gaagatggtaatacttctactgcagttcttttgggatccagtatcccagtaaagaatgca
gtacggccaattaagctacctgaagtgaagaggttacccccttacacatcatggattttt
ttggacagaaatcaaagaatgacagaggaccaatcggtgcttggtcgaaggagaatttat
tatgaccaaaatggtggtgaagcactaatctgcagtgacagtgaagaggaaataattgat
gaagaagaggagaagcgagattttttagaatctgaagattatattctacggatgactata
aaagaagctggattgtccgatccagttgtggaatcactagcacagtgtttttctagaagt
tctagtgaagtcaaggtaagatttgaggttcttaagaaggaagagaaggccgtggaggat
tctaagaataaagataatgaagcacaaacactgaattcttttcttgataaagatcttgaa
gttgctttggattcttttgacaacctattttgtcgccgatgtcttgtatttgattgcaga
ttacatggatgttcacaggatcttatcttccctgctgagaaacaatctccatggagctat
ccagatgacaacataacatgtggtccacagtgctacaaatcggttttgaaatcagagaga
atttcttcagggatttctcctgagcgtgggtttattgaagaaaattctgtttgtcaatca
gatggtgctggggtgcctataacatcaagaaagaaatcttctgctccatctgccaaccgg
agggtgaagtcctgccaaagtgaaagtgcttcgtcaaatgcaaaaaacatttcagagagc
agtgactcagagattggacctcggcaagacacctctcccactagtcagttgtcaccttcc
aagattaagcttgttgggaaaggtgggacttgtaaaaggaacagcaagcgggtggctgaa
cgtgttctaagttgcatgcggaaaaggcagaagaaaatggtggcttctgatactgattct
gttgctagtggaggccttctgtcaagtgatatgaaacttaggtccacttcacacaaagga
aaggaagatgcaagttcttcttcccataagaatttgaaatctcccaccactgcaaggtct
aggagaaagagtgagtttcatgatggtccatcaagtgagatggtcatggatccacctgtg
cctagcagtgatgacacctttaggaaagaagagttcatagacaaaaatacatgtaaaaaa
gagttaagtgataacagatcttggaaagctattgaaaaaagcctatttgagaaaggtgtt
gagatttttggcgggaacagttgcttaattgctaggaacctcttaaatggcttaaagaca
tgttgggaggtttttcaatatataactcgctctgagaataggctagcctgtgaggcaggt
gatgctggaactcttggtgaaggctactccaagtttgactgcagcggaacaaatgaagca
agaaggagatcaagatttttaaggagaagaggtagagttcgccgcttgaagtactcttgg
aaatctactgcttaccattctattaggaagcggataactgaaagaaaagatcaaccctgc
cgtcagtataatccatgtagttgccaagctgcttgtggaaagcagtgcacatgtctgcta
aatggcacctgttgtgagaagtattgcggatgtcctaagagttgcaagaaccgatttaga
ggctgtcattgtgccaaaagtcaatgtcgaagtcgtcaatgtccatgctttgctgcagac
agggaatgtgatccagatgtctgtaggaattgttgggtcagttgtggtgatggtactctt
ggtatccccagccaaaggggtgataattatgaatgcagaaatatgaagcttcttctcaaa
caacaacaaagggttttactcggaagatctgatgtatcaggctggggtgctttcttgaag
aatagtgtcggcaagcatgagtacctgggtgagtacactggagagctgatttcacatagg
gaagcagataagcgtgggaagatctacgaccgtgaaaattcatcatttctcttcaatctc
aacgatcagtttgttcttgatgcataccgtaagggtgacaaactcaagtttgccaaccac
tctccagaaccaaattgctatgcaaaggtcataatggttgcaggggatcaccgagtgggc
atattcgccaaagaaaggattaatgcaggggaggaacttttctatgattatcgttatgag
ccagacagagctcctgcttgggctaggaagcctgaagcgtctggatcaaagaaagaagat
ggcggtcattcaagtggccgtgccaagaagcttgcttaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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