KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_800398

Entry

POPTR_800398 CDS T01077

Definition

hypothetical protein

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00052	Galactose metabolism
pop00561	Glycerolipid metabolism
pop00600	Sphingolipid metabolism
pop00603	Glycosphingolipid biosynthesis - globo series

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:pop00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:pop00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:pop00600]
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - globo series [PATH:pop00603]

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_97

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 379 aa
MNVSSSNANLEDYTQFLLANGVARTPPMGWNSWNHFQCNIDERTIKTTADALVSTGLAAL
GYKYVNIDDCWGEEKRDWKGSLRAKASTFPSGIKALADYVHSKGLKLGIYSDAGTCSKKM
PGSLGHEEQDAKTFAEWGVDYLKYDNCYHDGSKPQDRYARMSYALRKVGRPILYSLCEWG
QEYPAKWAGFYGNAWRTTGDIKDTWESVISIADENNIWGRYAGPGRWNDPDMLEVGNGGM
SLEEYRSHFSIWALMKAPLLIGCDVQSASHETLRILGNKEVIDVNQDPLGVQGRKIRAKA
GLEIWAGSLSRKRVAVVLWNRSGSRAPITVGWREIGLSPYNPVIVRDLWAHSFVSMRKLH
GLTAYVASHACKMYILTPS

NT seq 1140 nt +upstreamnt +downstreamnt
atgaatgtcagcagcagcaatgccaatcttgaagactacacacagttccttctagccaat
ggtgtggctcgaacaccaccaatgggatggaatagttggaatcattttcaatgcaatata
gatgagaggactattaagactactgctgatgctcttgtttcaactggtttggcggcactt
ggatacaaatatgttaacattgatgattgttggggagaagagaaaagagactggaagggg
agtttaagggcaaaagcttctacctttccttctggtatcaaggctctagcagattatgtt
cattcaaaaggcttaaaacttggcatatattctgatgcaggaacctgcagcaagaaaatg
ccaggttctcttggacatgaagagcaagatgcaaaaacctttgctgaatggggagttgat
tacttgaagtatgataattgctaccatgacggatccaaacctcaggataggtatgctagg
atgagttatgcattgaggaaggttgggcggccgattctttactcgttatgtgaatgggga
caagagtatccggcgaaatgggctggtttctatggcaatgcttggagaactacaggggat
attaaagacacatgggaaagtgtgatatcaatcgcagatgaaaacaacatttggggtaga
tatgccggacctggcagatggaatgatcctgacatgttagaagtaggcaacggagggatg
agcttagaggagtaccgctctcattttagtatttgggctctaatgaaagctcctctactc
attggatgtgacgtccaatctgcaagccatgaaactcttagaatcctgggaaacaaggaa
gttatagatgttaatcaggatccattgggagttcaaggcaggaaaatacgagcaaaagct
ggcctagagatttgggcagggtcgttgtcgaggaagagagttgcagtagtgctatggaat
agaagtggatctcgggcccctataaccgtgggatggagggaaattggactttctccatat
aatcctgtcattgtcagagacctgtgggcgcactcatttgtttcaatgagaaaacttcat
ggattgactgcatatgttgcttcccatgcctgcaagatgtatatcctgactccatcctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (49)   

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