KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_814871

Entry

POPTR_814871 CDS T01077

Gene name

CHS2

Definition

chalcone synthase (EC:2.3.1.74)

Orthology

K00660

chalcone synthase [EC:2.3.1.74]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00941	Flavonoid biosynthesis
pop01100	Metabolic pathways
pop01110	Biosynthesis of secondary metabolites
pop04712	Circadian rhythm - plant

Class

Metabolism; Biosynthesis of other secondary metabolites; Flavonoid biosynthesis [PATH:pop00941]
Organismal Systems; Environmental adaptation; Circadian rhythm - plant [PATH:pop04712]

SSDB

Motif

Pfam:

Chal_sti_synt_N Chal_sti_synt_C ACP_syn_III_C FAE1_CUT1_RppA ACP_syn_III

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 391 aa
MVTVDEIRKAQRAEGPATILAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMC
EKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEIPKLGKEAAAKAIKEWGQP
KSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAEN
NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELV
SAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFW
IAHPGGPAILDQVEAKLELKPEKLRATRQVLADYGNMSSACVLFILDEMRKKSAKDGLKS
TGEGLEWGVLFGFGPGLTVETVVLHSLPATI

NT seq 1176 nt +upstreamnt +downstreamnt
atggtgaccgttgatgaaattcggaaggcgcagagggcagagggccctgccaccatcttg
gccattggaacatcaacccctccgaattgtgttgatcaaagcacctatcctgactattat
tttcgtatcaccaacagcgagcataaggtggagcttaaagaaaagttcaagcgaatgtgc
gagaaatccatgatcaagaagaggtacatgcacttgactgaggagatcttgaaagaaaat
cctagtgtgtgcgaatacatggcaccttcattggatgctaggcaggacatggtggtggtc
gagataccaaagttgggcaaagaagcagctgccaaggccatcaaggaatggggccagccc
aagtccaaaataacccatttggtcttttgcacaaccagtggtgttgacatgcccggggct
gactatcaactcactaagctcttgggtcttcgctcatcagtaaaacgtttcatgatgtac
cagcaaggttgttttgctggtgggacggtgctccgcctagctaaagaccttgctgaaaac
aacaaaggtgctcgcgtgctagtcgtgtgctcagaaataacagcagtgacatttcgtggc
cctagtgacacccacctcgatagtcttgtgggtcaagcgttgtttggtgacggcgcagct
gctatcataataggctcggatcctgtgctgggggtcgagaagcctttgtttgagctggtg
tctgccgcccagactattctacccgatagtgagggggctatagatggacatcttcgcgaa
gttgggcttacatttcaccttctcaaggatgtgcccgggcttatttcaaaaaacgtcgaa
aagagtctaaccgaggctttcaagcccttgggcatctcggattggaactcccttttctgg
attgcgcaccctggtgggcccgcaattctggaccaggtggaggctaagttggagcttaaa
cctgaaaaactgcgagccactcgacaagtactggctgactatggtaacatgtccagtgca
tgtgtgctatttattttggacgagatgaggaagaaatctgccaaggatgggcttaaatct
actggagaagggttggaatggggcgtccttttcgggttcgggcctgggcttactgttgag
acagtggtgctccacagtctgcctgccacaatttag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (16)   
   KEGG COMPOUND (16)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-POP (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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