KEGG T01077: POPTR

Populus trichocarpa (black cottonwood): POPTR_818003

Entry

POPTR_818003 CDS T01077

Definition

pectinesterase family protein (EC:3.1.1.11)

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00040	Pentose and glucuronate interconversions
pop00500	Starch and sucrose metabolism
pop01100	Metabolic pathways

Module

pop_M00081

Pectin degradation

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:pop00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:pop00500]

SSDB

Motif

Pfam:

Pectinesterase Beta_helix

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 316 aa
MASRVVTVAQDGSGDFTTVQEAVDAVPLCNTCRTVIRVPPGVYRQPVYVPKTKNLITLAG
LRPEDTILTWNNTSAKIDHHQASRVIGTGTFGCGTVIVEGEDFIAENITFENSSPEGSGQ
AVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIH
CKSAGFITAQSRKSSQESTGYVFLRCVITGNGGTSYMYLGRPWGPFGRVVFAYTYMDHCI
RHVGWNNWGKAENERSACFYEYRCFGPGSCPSKRVTWSRELIDEEADQFLMHCFIDPDPE
RPWLCQRMALSIPYSA

NT seq 951 nt +upstreamnt +downstreamnt
atggctagtcgagtggtgacggtggcacaagacgggagtggagactttacgacggtgcag
gaagcagtagatgcggtgccactctgcaacacgtgtagaactgtgattcgtgtgccacct
ggggtttacaggcagcccgtgtacgtgccgaagaccaagaatctcataactcttgcgggt
ttaagacctgaagacactatcttgacttggaacaacacttctgccaaaattgatcatcac
caggcttcgagggtcattggaactgggacgtttgggtgtgggactgtgatagtggaagga
gaggattttattgctgagaatatcacttttgaaaactcttctcctgagggttcaggccaa
gctgtggcaattagggtgactgctgatcggtgcgcattctataattgccggttccttggg
tggcaggatactctctatttgcattatgggaagcagtatttgaaagattgctacattgaa
ggaagtgtggactttatctttgggaacagcactgctctcttggaacattgtcatattcac
tgcaagtcagcaggttttataactgctcaaagcagaaaatcttctcaggagtcaactggt
tatgtctttttgagatgcgtgattactggtaatggagggacttcatatatgtaccttgga
cgtccatggggaccctttggaagagtggtctttgcatacacatacatggatcattgtatc
agacatgtaggatggaacaactggggtaaagcagaaaatgagagaagtgcttgcttttat
gagtacaggtgctttgggccaggtagttgcccatcaaaacgagtgacatggtcaagagaa
ctgatagatgaagaggcagatcaatttctgatgcattgtttcattgacccggatccagaa
aggccttggctatgccaaagaatggccttgagcattccatactccgcatag

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-POP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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