KEGG   Porphyrobacter sp. LM 6: BG023_112758
Entry
BG023_112758      CDS       T04468                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
porl  Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:porl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:porl03009]
    BG023_112758
Enzymes [BR:porl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BG023_112758
Ribosome biogenesis [BR:porl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BG023_112758
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF1062
Other DBs
NCBI-ProteinID: AOL95666
UniProt: A0A1D7NPN1
Position
2819842..2820795
AA seq 317 aa
MSEPEIITGTIPAPARLDKALAEATGLSRARVQGLIDEGRVDVAGNTATAASMKVAADTP
FRIILAAAMPAEALPEDIPLTIAYEDAHLIVVDKPAGMVVHPAVGNITGTLVNALLHHCR
GNLSGINGVARPGIVHRIDKDTSGLLVVAKSDAAHEGLAVQFAAHTVHRRYIAVCAGHPS
PSEGTINARVGRSDADRKKMTVLPNISSRGKTAITHYKVTERLDEAAVIECRLETGRTHQ
VRVHCASIGHPLLGDPAYGRTPKSLRPCLERLGFARQALHAAELGFVHPVTGETLRFQSD
LPQDMMELIDQLRISNR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgtccgaacccgaaatcatcaccggcacgatccctgctcccgcccgcctcgacaaggcg
ctggccgaagcgacggggctcagccgcgcgcgggtgcaggggttgattgacgagggccgc
gtcgatgtggcgggcaataccgcgaccgccgcttcgatgaaagttgccgccgacaccccg
ttccgcatcatccttgccgccgccatgccggccgaggcgctgccggaggatatcccgctc
accatcgcctacgaggacgcgcatctgatcgtggtcgacaaaccggcggggatggtcgtg
cacccggcggtggggaacatcaccggcacgctggtcaatgcgctgctgcaccactgccgc
ggtaacctctcaggcatcaacggggtcgcacggcccgggatcgtccaccggatcgacaag
gacacgtcagggctcttggtggtcgccaaatccgatgccgcgcatgaaggccttgccgtg
cagttcgccgcgcacaccgtccaccgccgctatatcgcggtctgcgccggccacccctcc
ccgtccgaaggcacgatcaatgcgcgcgtcggacgatcggacgcggaccgaaagaaaatg
acggtgctccccaacatttcctcgcgcggcaaaaccgcgatcacccattacaaggtgacc
gagaggctggatgaagccgccgtgatcgaatgccggctggaaaccgggcgcacccaccag
gtgcgcgttcactgtgcgtcaatcggccatccgctattgggagaccctgcctatggccgt
acacccaaatccttgcgcccgtgcctcgaacgactcgggtttgcgcgtcaggcgctgcac
gccgccgaactggggttcgtgcaccccgtgaccggcgaaacactgcggtttcagagcgat
ctgccgcaagacatgatggaacttatcgaccaactgcgaatttctaatcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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