KEGG T01092: PAS_FragB

Pichia pastoris: PAS_FragB_0039

Entry

PAS_FragB_0039 CDS T01092

Definition

DNA-dependent ATPase

Orthology

K10877

DNA repair and recombination protein RAD54B [EC:3.6.4.-]

Organism

ppa Pichia pastoris

Pathway

ppa03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ppa03440]

SSDB

Motif

Pfam:

SNF2_N DEAD ResIII Helicase_C HDA2-3 AAA_22

Other DBs

NCBI-GI:

254567481

NCBI-GeneID:

8196516

UniProt:

C4QZ97

Position

1:complement(2730924..2733446)

AA seq 840 aa
MYKKPMNRPFKPPRMQEATNKPVKPAQPAKIFKRKPEVLSPGTPEVAQTRTTNSVNVLWR
KKTLKKNKTWDGDGILVITGDQLIFKCDPLGGSNLREQGRRSKSSKSLEGVIAIGNYEIE
LDGEISDVKPASKKHRKIEHEVSSEKESITSADKKSSSLPFKSPMTNSVTRQPQKKSAPP
YKSDYEHSIVLSQESETSKMVVVDPLLSQHLRPHQREGVKFLYNCLDGSKELPHKGCILA
DEMGLGKTLTTITLIWTLLKQNQVDHKRPAVKKVLVVCPVTLIHNWKREFRKWLGMNRVS
ILEMSSASNVEEDKRSVINFGRTRVYQILILGYEKLQKLTNEISQINVDLLVCDEGHRLK
NSNNKVMKSLTSFQIPRKIILTGTPIQNDLNEFYNIINFVQPGIVGDFASFNRDYMRPIL
QAREINCLNRKIIKAGNEKSNSLVELTQKFILRRKAKDINTNFLPPKTELILMVPMTELQ
QELYKDIIETNQAKLGLINDRNFFLQKILILRKICNSPSLLKDEPDFARYNLGNRFNSGK
IKLTVLLLRKLFETTNEKCVIVSNFTKTLDVLQLIIEHNNWKYHRLDGSSKGRDKIVRDF
NESPQKDRFIMLLSSKAGGVGLNLIGASRLILFDNDWNPSVDIQAMARVHRDGQKRHTFI
YRLYTKGTIDEKILQRQLMKQNLSDKFLDDNDSSKDDVFNDYDLKDLFTVDLDTNCSTHD
LMECLCNGRLRDPTPVLEAEECKTKPLEAVDDTDDGWMSALDFKQLSQKEETGAVSTMRQ
CLLGYQHIDPKILEPTEPVGDDLVLANILAESSGLAKSALSSEKKPKKPVVNFIFVSGQD

NT seq 2523 nt +upstreamnt +downstreamnt
atgtacaaaaagcccatgaatcggccgtttaaaccgccgaggatgcaagaggccactaat
aaaccagtaaaaccagcccagcctgcgaaaattttcaaaagaaaaccagaagttttgtct
cctgggacacctgaagttgcacaaacaaggactacgaactccgtcaatgttctatggaga
aaaaagaccctcaagaagaataagacttgggacggtgatgggatcttagtgattacggga
gaccagttgattttcaaatgtgacccgttgggaggttccaacttaagagaacagggtaga
agatccaaatcttcaaagagtcttgaaggtgttatagccataggcaattacgaaatagaa
cttgatggcgagatttctgacgtgaagcctgcttcgaagaaacatagaaaaatagaacat
gaggttagttcggaaaaagaatccataacttcagcagataagaaatcttcctcccttccc
ttcaagagccccatgacaaattcagtgactagacaaccacagaagaaaagcgctccacca
tataaatcagattatgagcattcgattgtactatctcaagaatcggagacttctaaaatg
gtagtagtggatccgttgctcagccaacatttgagacctcaccaaagggagggtgtgaaa
tttctttacaattgtctggatggctccaaagagttgccacataaaggatgtatattagca
gatgaaatgggacttggaaagacattgaccacaattaccctcatttggactttacttaaa
caaaaccaggttgatcacaaacgaccagcagtgaagaaggtactggttgtgtgtcctgtt
actctgatacacaattggaaaagagaatttcgaaagtggcttggaatgaatagggtcagt
attttggaaatgagcagtgcatcaaatgtagaagaagacaaacgaagtgtgatcaacttt
ggacgaaccagagtgtaccaaatattgatcttaggttatgaaaaactgcaaaagttgacg
aatgaaatttcccaaattaacgttgatttgttggtatgtgatgagggacaccggttgaag
aactcaaacaataaggtgatgaaaagtttgactagtttccagattcctcgtaaaataatt
ttgacaggaactccaatccaaaatgatttgaatgaattctataatatcatcaattttgtt
cagcctggaattgttggagattttgctagttttaacagggactacatgaggccgattctt
caagccagggaaattaattgcttgaaccggaaaatcattaaggcaggcaacgaaaaatcc
aactccttggttgaattgactcaaaagtttatcttacggagaaaagctaaagacatcaat
acgaatttccttccgccaaaaactgaactgatactgatggttccaatgactgaattacaa
caggagctatacaaggatataattgaaactaaccaagccaagcttggcttgatcaacgac
agaaacttttttcttcaaaaaattttgattcttcgtaaaatatgcaattcaccctccctg
ctgaaagacgaacctgattttgccagatacaatctcggcaatagattcaatagcggtaag
atcaagctaacagtactgcttttacgaaagctgtttgaaaccaccaatgagaagtgtgtg
attgtttcaaacttcactaaaactttggacgtacttcagctaatcatagagcacaacaat
tggaaataccaccgactagatggttcgagtaaaggacgggacaaaatcgtacgagatttt
aacgagtcgcctcaaaaagatcgattcatcatgttgctttcttccaaggcagggggagtg
gggctcaacttaattggagcctcacgcttaattctttttgataacgactggaatcccagt
gttgacattcaagcaatggctagagtgcatcgagacgggcagaaaaggcacacctttatc
tatcgtttgtatacgaaaggcacaattgacgaaaagatcctacaaaggcaattgatgaaa
caaaatctgagcgacaaattcctggatgataatgatagcagcaaggatgatgtgtttaac
gactacgatctcaaagatttgtttactgtagatcttgacacgaattgtagtacacacgat
ttgatggaatgtttatgtaatgggcggctgagagatccgactcccgtcttggaagcagaa
gaatgcaagacaaaaccgttggaggccgttgacgacacggatgatggttggatgtcagct
ctggatttcaaacagttatcacaaaaagaggagacaggtgctgtgtcaacaatgcgtcaa
tgtctgctcggatatcaacacattgatccaaagattttggaaccaacagaacctgtaggg
gacgatttggtattggcaaacatcctcgcggagtcctcaggcttggctaaatctgcattg
tcatctgaaaagaaacccaagaaaccagtggtgaactttatctttgtgtcaggccaagac
taa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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