KEGG T01092: PAS_chr3

Pichia pastoris: PAS_chr3_0732

Entry

PAS_chr3_0732 CDS T01092

Definition

DNA ligase required for nonhomologous end-joining (NHEJ)

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

ppa Pichia pastoris

Pathway

ppa03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ppa03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT mRNA_cap_enzyme DNA_ligase_IV

Other DBs

NCBI-GI:

254571701

NCBI-GeneID:

8200427

UniProt:

C4R5E5

Position

3:complement(1394459..1397257)

AA seq 932 aa
MSEELKEPKNRAPLPNFSHLVYDLFEKLDTCVKSPHIPESLRSRKTKIIEQFVQKWRFEI
GDNIYPASRLIFPNLDKRHYNIKDFTLIKFILDIFQVPKDSEDTKILRNWKGKYENRMRS
NKNDLAQLLTGVIKARRGAVLDRPEISIDRLNELLDTMTRPETKPSDQKKILTEIFNHVD
NIELKWFLRILLKRKLMGGMDFTFFRQWHPDAVELLQLVNDLKTVFWELTDRLIPLPEAG
RVIRVGRAFRPQLAMRPNRTYDQIATLFDNNFYIEDKLDGERILIHISLNDTTQQHEFKY
FSRSGTDYTYLYGSNYEEGAFSPFIKGCFIDLKDDTKEIRSMVLDGEFLVYDNKRNVILP
FGALKSASLTRLMEEKNDSEDSQETQVYFVVYDLVFLNGTSFQDKALKVRRNLLNKILAN
PIPNRIEVIKYTEGHVGSDIEAAMRSAIHDNREGIVVKNPKSKYYIASRNLNWVKIKPEY
LEEFGENIDLIILGKRKGLKNAYICGLRESLGNDRYRFLSLARIANGFTGQMYEEIEHSL
GSKWVNIRKTQPPYPYIDLGEISSMVDYWVDPKESVVLEIKARSIDIGDGGKRYAAGTTL
YNAYCVRIRSDKDFLSCSTFADYKEIKTSKSRHKTEKTHSLMSKRKRTIVTEPILAKQSV
SSKSSIFKDYIFYVLSDMLGEKRYSIAQLEALLVENGGRITKNDCVALADGERLVLLSDK
ITFKVTEYFNKGLNVFRPGFILKCLQLKTIIPLQINDILLADESLIEKVKKNSDRFGDSY
TSPIDRKELRMLMKGIPKIKLEHPLKFPLLYNLFKGLKFYIARPCYRSPFLTNVMSPYLL
EVIVILGGFLTTDIFQCSFIIVDTSTTFNYSWLTEEATIQDEVGSLRKKLGDDLPIVKGV
LDKVPRIVEKEWVFKCIQEGTIVAADGYNYIG

NT seq 2799 nt +upstreamnt +downstreamnt
atgagtgaagagttgaaggagccaaaaaacagagcccctttacctaatttcagccatcta
gtttatgaccttttcgaaaaattggatacatgtgtcaaatcgcctcatattcctgaatct
ctcagaagtcgaaagaccaagataatagagcagtttgtccaaaaatggagatttgagata
ggtgataacatatatcctgcctcaagacttatttttcccaatttagataagcgtcactat
aatatcaaggattttacattgatcaagttcatattggacatcttccaagttccaaaagac
tccgaagatacgaagattttacgtaactggaaagggaagtatgagaatagaatgcgctcc
aacaaaaatgatctagctcaattactcactggagttattaaagctaggagaggtgctgtt
ttggatcggccagaaatttctattgacagactgaacgaacttttggatacaatgactcgc
cctgaaacaaaaccgtctgaccaaaaaaagattttgacggagattttcaatcatgtagat
aatattgaactgaaatggtttcttcggatcctactgaaaaggaagttaatgggtggtatg
gattttactttttttaggcagtggcatccagatgctgtagaattacttcaactggttaat
gacctgaaaactgtattctgggaactgactgatcggttgattccattgcctgaagcgggc
agagtcatcagagttgggcgtgcattcaggcctcaactggcaatgcgacccaatagaact
tacgatcaaatagctactctatttgacaataatttctacattgaagataaactagatggc
gaacggattttgatacacatcagcttgaatgacacaacccaacaacatgaattcaagtac
ttttcaaggagtggaactgactatacatatttatacgggtcaaactacgaagaaggtgca
ttctctcctttcatcaaaggttgcttcatagatctcaaagatgacacaaaagaaatccga
tctatggttttggatggggagtttctcgtttatgataacaaaagaaatgttattctcccc
tttggggctctcaagagtgccagtttaacgagattgatggaggagaaaaacgattcggaa
gactctcaagagacgcaagtgtatttcgttgtttatgatcttgtattcttaaatggtaca
tcatttcaagacaaagctctcaaggtaaggcggaatttactgaataaaattcttgcaaat
ccaatccctaacagaatagaagttatcaaatacacggagggtcatgtcggatcggatatc
gaagctgccatgagaagtgctatacacgacaatcgtgaaggaatcgtagtgaagaatcca
aaatcaaagtattatattgcatccagaaatctcaactgggtcaagataaaacctgagtac
ttggaagaatttggagaaaatatagatttgattattctaggcaaaagaaaaggactgaaa
aacgcctatatctgtggactcagagagagtcttggtaatgaccggtacagattcttgtca
ctggccagaattgccaatggatttacagggcaaatgtatgaagaaattgaacattcactg
gggagtaaatgggtcaatataaggaagacgcaaccaccttatccatacattgatctcgga
gagatatcatcgatggtggactattgggttgatcccaaagaatctgtcgttttagagatc
aaggctcgttcaattgatattggtgatggcgggaaacgttacgcagctggtaccactctt
tacaatgcgtattgtgtaagaattagatctgataaagacttcttatcatgttcgactttt
gcagattacaaagaaataaaaacttcaaagagtagacacaaaacagagaaaacacacagt
ctaatgagtaaacgaaagaggacaatagtcactgaaccaattctcgctaaacaaagtgta
tcttcgaagagcagcatattcaaggattacatcttttatgttttaagtgacatgttgggt
gaaaaacgatactctattgctcagctggaggctttgctggtcgagaatggtggcagaata
actaagaatgattgcgtagctcttgcagatggcgagaggcttgttttacttagtgacaag
attactttcaaagtcacagagtactttaataaaggtctaaatgtctttcgaccaggcttc
attctgaagtgtcttcagctgaaaactataattcctctacaaattaacgacatattactg
gcggatgagtctttgatagaaaaggtaaagaaaaactccgaccgatttggggatagttat
acctctcccattgaccgtaaggagttgcgaatgcttatgaaaggtatacctaagataaag
ttagaacacccactaaaatttccactactgtacaacttgttcaagggcctgaagttttat
atcgcaagaccatgctatagatctccatttctgacaaatgttatgagtccatacttgtta
gaagtaatagtgattctaggaggatttcttacaactgatattttccaatgttcatttata
atcgtggatacttccaccacattcaactattcctggttgactgaggaggcgaccatacag
gatgaagttgggtctctaagaaaaaagctgggtgatgatctaccaatcgtcaaaggtgtt
ctagataaagtaccccggatagtagagaaagagtgggtgttcaaatgtatccaggaaggg
acaatcgttgctgcggatggctataactatatcggttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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