KEGG T01092: PAS_chr4

Pichia pastoris: PAS_chr4_0034

Entry

PAS_chr4_0034 CDS T01092

Definition

Subunit of heterotrimeric Replication Protein A (RPA)

Orthology

K10739

replication factor A2

Organism

ppa Pichia pastoris

Pathway

ppa03030	DNA replication
ppa03420	Nucleotide excision repair
ppa03430	Mismatch repair
ppa03440	Homologous recombination

Module

ppa_M00288

RPA complex

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:ppa03030]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ppa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ppa03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ppa03440]

SSDB

Motif

Pfam:

tRNA_anti-codon RPA_C CCDC144C

Other DBs

NCBI-GI:

254572660

NCBI-GeneID:

8201126

UniProt:

C4R6N5

Position

4:70728..71483

AA seq 251 aa
MSYQPYNNFNDNAEGGGFTTYNNNDGDGQGSQGKTQQRNTIKPVTIKQINDSKTIISDGE
FVVNGVELNMVSFVGIIRNVNDNTSSLTITIEDGTGSLDVRKWVDEGSDPSENNYPLGQY
VYVTGLLKEFNEKKSLQQATINPIEDYNQVTYHYLSAIKVHVEANQQGSHQQGNSLFVSQ
NADDHTNSNDPSEKVYRFIHDNTPSMVEGVPIQYIAQSLSLTDNEVINYCNQLSDVGKIY
NGNDDSSYLAV

NT seq 756 nt +upstreamnt +downstreamnt
atgtcgtaccaaccatacaataactttaatgacaatgcagaaggtggcggattcaccacc
tataacaataatgacggagatggccagggttcacagggaaaaactcaacagagaaataca
attaagccggttacaatcaagcagatcaatgacagcaagactataatctccgatggcgaa
tttgtcgtgaatggagtcgaattgaatatggtttcattcgtaggaattatcaggaatgtc
aacgacaatacctcttctttgactataacgatagaagatggtactggatctctggatgtc
agaaaatgggtggacgaaggctcagatccatccgagaataactaccctttgggacaatat
gtatacgtcacagggttgctcaaagagtttaacgaaaaaaagtcacttcaacaggccact
atcaatccgattgaagattataaccaagttacttaccactacctctcggccatcaaggtt
catgtagaggccaatcaacagggttctcatcagcaaggaaactctttatttgtatctcag
aatgcagacgaccatacaaacagcaatgatccttctgagaaggtctaccgtttcattcac
gataacacgccctctatggttgaaggcgtccctatacagtacattgcacagtcactatca
ttgactgataatgaagtaatcaactactgcaaccagctttcagatgttggtaagatttac
aatggtaatgacgatagcagctatcttgctgtctaa

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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