KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_4035Help
Entry
PPUBIRD1_4035     CDS       T01975                                 

Gene name
dapE
Definition
DapE (EC:3.5.1.18)
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppb00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    PPUBIRD1_4035 (dapE)
  Amino acid metabolism
   00300 Lysine biosynthesis
    PPUBIRD1_4035 (dapE)
Enzymes [BR:ppb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     PPUBIRD1_4035 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4515978..4517129
Genome map
AA seq 383 aa AA seqDB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMSRLGAVGFQLEPMRIEDVDNFWATH
GSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLP
FLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq 1152 nt NT seq  +upstreamnt  +downstreamnt
atgacggcccctgccgagctctcgcctacccttcaactggcctgcgaccttatccgtcgc
ccctcggtcacccccgtcgacgccgattgccaggcgcagatgatgagccgtctgggcgcc
gtcggtttccagctggagccgatgcgcattgaagacgtcgacaacttctgggctacccac
ggcagccaggacggcccggtactgtgttttgccggccacaccgacgtggtgcctaccggc
ccggtccagcaatggcagcatgaacccttcgaggcactgatcgacgccgacggcatgctc
tgcggccgtggcgccgccgacatgaagggcagcctggcgtccatggtcatcgccagcgag
cgcttcgtgcaggactacccgaaccatcgcggcaaggtcgcgtttctgatcaccagcgac
gaggaaggccccgcccaccacggcaccaaagcggtggtcgagcgcctgaaagcgcgcaac
gagcgcctggactggtgcatcgtcggcgaaccgtccagcaccaccttgttgggtgacgtg
gtcaagaacggtcgccgcggttcgctgggcgccaaactgaccatacgcggcaagcagggc
catgtggcctacccgcacctggcgcgcaacccgatccacctggccgccccggccctggcg
gaactggctgccgagcactgggacgaaggcaatgccttcttcccgccaactagcttccag
atctccaacctcaattccggcaccggcgctaccaacgtggtcccgggcgagctgaccgcg
ctgttcaacttccgcttctctaccgagtccaccgtcgaaggcctgcaggcccgagtgtcg
gcgattctcgacaagcatgaactggactggtcggtcgactgggcactgtcgggcctaccg
ttcctgaccgaaccaggcgagctgctcgacgccgtggcggccagcatcaagggcgtcacc
ggtcgcgatacccagccttccaccagcggcggtacctccgatggccgcttcatcgcaacc
atgggcacccaggtggtcgaactcggcccggtcaacgccaccatccaccaggttgacgag
cggatcctggccagcgacctcgatctgctgaccgaaatctactaccagaccctggtccgg
ttgctcgcctga

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