KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_4035Help
Entry
PPUBIRD1_4035     CDS       T01975                                 

Gene name
dapE
Definition
(GenBank) DapE
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb00300  Lysine biosynthesis
ppb01100  Metabolic pathways
ppb01120  Microbial metabolism in diverse environments
ppb01230  Biosynthesis of amino acids
Module
ppb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppb00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    PPUBIRD1_4035 (dapE)
Enzymes [BR:ppb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     PPUBIRD1_4035 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_M20 M20_dimer Glyco_transf_20 BNR_2
Motif
Other DBs
NCBI-ProteinID: ADR61618
Position
4515978..4517129
Genome map
AA seq 383 aa AA seqDB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMSRLGAVGFQLEPMRIEDVDNFWATH
GSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLP
FLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq 1152 nt NT seq  +upstreamnt  +downstreamnt
atgacggcccctgccgagctctcgcctacccttcaactggcctgcgaccttatccgtcgc
ccctcggtcacccccgtcgacgccgattgccaggcgcagatgatgagccgtctgggcgcc
gtcggtttccagctggagccgatgcgcattgaagacgtcgacaacttctgggctacccac
ggcagccaggacggcccggtactgtgttttgccggccacaccgacgtggtgcctaccggc
ccggtccagcaatggcagcatgaacccttcgaggcactgatcgacgccgacggcatgctc
tgcggccgtggcgccgccgacatgaagggcagcctggcgtccatggtcatcgccagcgag
cgcttcgtgcaggactacccgaaccatcgcggcaaggtcgcgtttctgatcaccagcgac
gaggaaggccccgcccaccacggcaccaaagcggtggtcgagcgcctgaaagcgcgcaac
gagcgcctggactggtgcatcgtcggcgaaccgtccagcaccaccttgttgggtgacgtg
gtcaagaacggtcgccgcggttcgctgggcgccaaactgaccatacgcggcaagcagggc
catgtggcctacccgcacctggcgcgcaacccgatccacctggccgccccggccctggcg
gaactggctgccgagcactgggacgaaggcaatgccttcttcccgccaactagcttccag
atctccaacctcaattccggcaccggcgctaccaacgtggtcccgggcgagctgaccgcg
ctgttcaacttccgcttctctaccgagtccaccgtcgaaggcctgcaggcccgagtgtcg
gcgattctcgacaagcatgaactggactggtcggtcgactgggcactgtcgggcctaccg
ttcctgaccgaaccaggcgagctgctcgacgccgtggcggccagcatcaagggcgtcacc
ggtcgcgatacccagccttccaccagcggcggtacctccgatggccgcttcatcgcaacc
atgggcacccaggtggtcgaactcggcccggtcaacgccaccatccaccaggttgacgag
cggatcctggccagcgacctcgatctgctgaccgaaatctactaccagaccctggtccgg
ttgctcgcctga

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