KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_4371Help
Entry
PPUBIRD1_4371     CDS       T01975                                 

Gene name
recD
Definition
recombinase D (EC:3.1.11.5)
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppb00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    PPUBIRD1_4371 (recD)
Enzymes [BR:ppb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PPUBIRD1_4371 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4870115..4872190)
Genome map
AA seq 691 aa AA seqDB search
MSRSLVDLLPTPLHAEHLLALAPQHNSADLLQLLDRWVERGWLRALDRAFVSFLEERAPG
SDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALIGPLLLPSQLLANLD
LNAWLQRISASPLVAAGDTPGQQARPLVRSGERLYLRRYWSYERRIDQALRQRLSQAEAP
PADLPERLAQLFEGGAPAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLALLQA
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVSAEVRGQIPTEVNTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASVEAGA
VLGDLCRDAEEGFYSPATAAWLQQVSGESLAGSGLKAGDEQRHPLAQQVVMLRFSRRFGE
GSGIGQLARLVNRQDAHAARNLLAAPPADVHSLSLKHEQDRAFDRLLLDGLNRGTDGPQG
YRSYLRTLGRYRPALDTAFDDPAWEQWAGKVLRSFEDFQLLCAVRRGAWGVEGLNERVAR
VLHNAGLIDSHQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDEHGQPLLRVAFPRNDG
SGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPEALNPVLTKELVYTGITRAKH
CFSLVEPRQGIFEEAVARKVRRISGLMLEQV
NT seq 2076 nt NT seq  +upstreamnt  +downstreamnt
atgagccgaagccttgtcgacctgttgcccaccccgttgcacgcagagcacctgctggcg
ctggcaccacagcacaacagcgctgatctgctgcaattactcgaccgctgggttgagcgg
ggctggctacgtgccctggaccgcgcgttcgtgtcgttcctggaggagcgtgcccccggc
agtgatcccttactattgctggcagcggcgctggccagccaccaactggggcacggacat
gtctgcctcgacctgcaacaaaccttggccgagccggatttcgccctctcgttgccgccg
gaaggtgacgcccttatcggccctttgctactgccatcgcaactgctggccaaccttgac
ttgaatgcctggcttcagcgcatcagcgccagcccgctggtggccgcaggtgatacgcct
ggccagcaagcgcggccactggtacgcagtggcgagcgcctttacctgcgccgttactgg
agttacgagcggcgcatcgaccaggccctgcgccagcgcctgagtcaggccgaagcaccg
cctgcggacctgccagagcgcctggcgcaactgttcgagggcggtgcgccagctggccag
gtggactggcagaagctcgcctgcgccttggccacccgggccggtttcagcatcatcact
ggcggacccggcaccggcaagacgaccaccgtggtgcgcctgctggcgttgctgcaggcg
ccggcagtggagcagggcaggccactgcgcatccgcctggctgcgccgaccggcaaggcc
gctgcgcgcctgaccgaatccattggccagcaagtcgagcgcctgcaagtcagcgccgaa
gtacgcgggcaaatccccactgaagtcaacaccgtgcatcgcctgctcggcagccgcccg
ggctcgcggcatttccgccatcatgctggcaacccgttaccgttggacgtgctggtggtc
gacgaagcgtcgatgatcgacctggaaatgatggccaacctgctcgatgccttgccgccg
cgggcgcgtctggtgctgctgggcgacaaggaccagttggcctcggtcgaggccggcgcg
gtactgggtgacctgtgccgggatgctgaggagggcttttactcgccggcgactgcagcg
tggcttcagcaggtcagtggcgagtcgctggccggcagtggcctcaaggccggcgatgag
cagcgtcacccgctggcccagcaggtggtgatgctgcgtttttcacggcgtttcggtgaa
ggcagcggaattggccagctggccagactggtcaatcgtcaggacgctcacgcggcgcgc
aacctgctggccgcgccgcctgccgacgtgcacagcctgtcgctcaagcacgaacaggat
cgtgcgttcgaccgcctgttactcgacggcctgaaccgcggtaccgatggaccgcaaggc
taccgcagctacctgcgcacccttggccgttaccggccggcacttgataccgcctttgac
gaccccgcctgggagcaatgggcgggcaaggtgttgcgcagtttcgaggatttccagttg
ctgtgcgcggtgcgccggggcgcctggggtgtcgaaggcctcaacgagcgggtggcgcgg
gtgctgcacaatgccggtctgattgacagtcatcagccctggtacgaagggcgcccggtg
ttggtgacccgcaacgactacggccttggcctgatgaacggtgacatcggtattgccctg
cgcctgccggatgagcatggccagccgctgctgcgtgtggcgttcccgcgcaacgacggc
agtggtggtgtgcgattcgttctgccgagccggctcaacgaagtggaaacggtgttcgcc
atgaccgtgcacaagtcgcaaggctcggagttcagccacacagccctggtgctgccggag
gcgctcaacccggtgctgaccaaggaactggtgtacaccggcatcactcgggccaagcac
tgcttcagcctggtcgagccacggcaaggcattttcgaagaagcggtggcgcgcaaagta
cggcgtatttccgggttgatgctcgagcaggtctag

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