KEGG   Pseudopropionibacterium propionicum: HMPREF9154_2003
Entry
HMPREF9154_2003   CDS       T02180                                 
Name
(GenBank) pseudouridylate synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ppc  Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:ppc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppc03009]
    HMPREF9154_2003
Enzymes [BR:ppc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     HMPREF9154_2003
Ribosome biogenesis [BR:ppc03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HMPREF9154_2003
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 HTH_3
Other DBs
NCBI-ProteinID: AFN46525
Position
complement(2195210..2195944)
AA seq 244 aa
MTEPEGIRLQKVLAAAGVASRRASEILISEGRVEVNGKVVSEQGRRVDPERDTIRVDGAR
IPPPRRHRYLVLNKPRGVVSTMDDPEGRRTLVDYLPRKSERLFHIGRLDTDTEGLILLTN
DGEFAHRLSHPSFEVPKTYVAEVAGIVDQRTIQRLEKGLRLEDGPVKPDRVKLLSRGESR
SLLAITLHEGRNRIVRRMMDSVGHPVDRLARTGIGPVRLGQLTIGTTRELTREELGVLLD
LVGM
NT seq 735 nt   +upstreamnt  +downstreamnt
atgactgagccggagggcatccgcctgcagaaggtgctggcggcggccggggtggcgtcg
cgccgggccagcgagatcctgatctccgagggacgcgttgaggtcaacggcaaggtggtc
tccgagcagggacgccgggtggatccggaacgcgacacgatccgggtcgacggggcccgc
atccccccgccgcgcagacaccgctacctggtgctgaacaaacctcgcggggtggtttcc
accatggacgacccggagggcaggcgcaccctggtggactacctgccgcggaaatcggaa
cggctgttccacatcgggcgtctcgacaccgacaccgagggcctgatcctgctgaccaac
gacggtgaattcgcgcaccgtctctcccaccccagcttcgaggttccgaagacctacgtg
gcagaggtcgcaggcatcgtggaccaacggaccattcagcgcctggagaaggggctgcga
cttgaggacggtcccgtcaaacccgatcgggtcaaactgctctcgcgcggtgagtcgcgt
tcgctgctggcgatcaccctccacgagggccgcaaccgcatcgtcaggcgcatgatggat
tccgtgggtcacccggtggaccggctggcgcgcaccggcatcggccccgtccggctcggg
cagctcaccatcgggaccacccgcgaactgacccgcgaggagctgggagtgctgctcgat
ctggtgggtatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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