KEGG   Pseudopropionibacterium propionicum: HMPREF9154_2882
Entry
HMPREF9154_2882   CDS       T02180                                 
Name
(GenBank) hypothetical protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
ppc  Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:ppc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppc03400]
    HMPREF9154_2882
DNA repair and recombination proteins [BR:ppc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     HMPREF9154_2882
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 AAA_16 FtsK_SpoIIIE Zot AAA_30 ResIII TrwB_AAD_bind Isochorismatase CbiA AAA_10 AAA_6 AAA_19 Hydrolase Nop14 AAA_5
Other DBs
NCBI-ProteinID: AFN47710
Position
complement(3123986..3125572)
AA seq 528 aa
MSEELVATIQAGYGFDGEAVQLGVLMDGAPVVEAPIRIPLAMFNRHGLVAGATGTGKTKT
LQLMAEALSKAGVPVFAADIKGDLSGMASPGVASEKLAARTEAQGQPWEAKAAPCEFLAL
GGQGTGIPVRATISSFGPILLSKVLGLNEVQESSLGLVFYYADNNGLPLLDLKDLVALLK
FLTSDDGKDELKEIGGVSAATAGVILRNLVGLSEQGGDVFFGEPEFEPSELLRVAADGRG
VVSLLELPDLASRPEMFSTFLMWLLADLFGSLPEIGDADKPKLVFFFDEAHLLFKGASKA
FLDSITQTVRLIRSKGVGVFFVTQTPKDVPEDVLAQLGSRVQHQLRAHTPNDAKALKATV
STYPKSGYDLEEVLQGLGIGEAIVTVMNPKGSPTPVAWTRLWAPETSMQPTDAAAMQQAV
AASPLMAKYGQAIDRESAYEILTAKLEAGAKAAEEERQRAEAEKAEAERRAQEEKEQRQA
ERSEGRSSGSGRGRTSAVERIASRGIMQVIRTVTREIVRGLFGTGRRR
NT seq 1587 nt   +upstreamnt  +downstreamnt
gtgagtgaagaactggtggcaacgattcaggctggatacgggttcgacggtgaggcggtg
cagctgggcgtgctgatggacggcgcccccgtcgtcgaggcccccatccgcattccgctg
gcgatgttcaaccggcacgggctcgtcgccggggccacgggcaccggcaaaaccaagacc
ctccagctgatggccgaggccctcagcaaggcgggagtgcccgtcttcgccgccgacatc
aaaggggatctgtccgggatggcctcccccggggtggcgagcgagaaactggccgcgcga
accgaggcgcaggggcagccctgggaggcgaaggccgcgccctgcgagttcctggcgctc
ggcgggcagggcaccggaatcccggtgcgggcgacgatctcgtcgttcggcccgatcctg
ctgtcgaaggtgctgggactcaacgaggtgcaggagagctccctcgggctggtgttctac
tacgccgacaacaacggcctgccgctgctcgacctcaaggacctcgtcgcgctgctgaaa
ttcctcacctcagacgacggcaaggacgagctgaaggagatcggcggggtctcggccgcc
acggccggggtgatcctgcgcaacctcgtcggcctctccgagcagggcggtgacgtgttt
ttcggggaacccgagttcgaaccctcggagctgctgcgcgtcgccgccgacggccgcggg
gtcgtctcgctgctggagctgcccgacctggcctcgcgacccgagatgttctccaccttc
ctgatgtggctgctggccgacctgttcggttccctccccgagatcggcgacgccgacaaa
ccgaaactggtgttcttcttcgacgaggcgcacctgctgttcaagggcgcctccaaggcc
ttcctcgactccatcacccagaccgtgaggctgatccgctccaaaggcgtgggggtgttc
ttcgtcacccagacccccaaggacgtgcccgaggacgtcctggcgcagctcggcagccgc
gtgcagcaccagctgcgcgcccacacccccaacgacgccaaggcgttgaaggcgacggtg
tcgacctacccgaagtccggctacgacctggaggaagtgctgcagggcctcgggatcggc
gaggccatcgtcaccgtcatgaaccccaagggctcacccacccccgtcgcctggacccgg
ctgtgggcccccgagacatcgatgcaacccaccgacgccgccgcgatgcagcaggcagtg
gcggcctcgccgctgatggcgaagtacgggcaggccatcgaccgcgagtcggcctacgag
atcctcaccgcgaaactggaggccggcgcgaaggcggccgaggaggaacggcagcgcgcc
gaggcggagaaggccgaggccgaacgtcgcgcccaggaggagaaggaacagcgccaggcg
gagcggtcggaggggcggtcgtcgggatcgggtcgtggtcgcacgtcggcggtggaacgg
atcgccagccgcggcatcatgcaggtgatccgcaccgtcacccgggagatcgtccggggc
ctgttcggcacgggcaggcggcggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (32)   

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