KEGG   Pelobacter propionicus: Ppro_0004
Entry
Ppro_0004         CDS       T00436                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ppd  Pelobacter propionicus
Brite
KEGG Orthology (KO) [BR:ppd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppd03032]
    Ppro_0004
   03400 DNA repair and recombination proteins [BR:ppd03400]
    Ppro_0004
Enzymes [BR:ppd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Ppro_0004
DNA replication proteins [BR:ppd03032]
 Prokaryotic type
  DNA Topoisomerases
   Ppro_0004
DNA repair and recombination proteins [BR:ppd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Ppro_0004
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 DUF4230
Other DBs
NCBI-ProteinID: ABK97645
UniProt: A1AJX5
Position
3803..6211
AA seq 802 aa
MSEHNNVTQSNVEEYSADNIKVLEGLAAVRKRPAMYIGSTSGAGLHHLVYEIVDNSIDEA
LAGHCDNISVTINVDGSVTVIDNGRGIPTDMHPTEGRSAAEVVLTVLHAGGKFDNDSYKV
SGGLHGVGVSVVNALSKWLELEIKRDGKIFRQSYRRGDPVAPLAETGATRKRGTKVTFMP
DEEIFETTEFSFDVLSQRLRELAFLNAGVRIGISDMRVDNKSHEFYYEGGINSFVEYLNR
NKIAVHPKPIYFRGEKGGVETEVSMQYNDSFDEKIFSFANNINTHEGGTHLVGFKAALTR
TMNAYAAANNLLKKEKVSISGDDLREGLTCVISVKIPQPQFEGQTKTKLGNSEVKGYVES
MINEKLAQFLEENPQVAKRILEKSIEAARAREAARRARETVRRKGALDLGGLPGKLADCQ
EKNPEHCELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKSRFDKMISSQEIRTLI
TALGTGIGKDDFDISKLRYGRIIVMTDADVDGSHILTLLLTFFYRNMNELIQRGHLYIAQ
PPLYKVKRGKKEMYLRNEAALQNFLLEEGAEDLVLRLEKGDRKYLGKQIIPVIRQFIDNR
AIFDKVVKKGISQELLSIIVRSNVPAGLEELSQVEPYLEAMKELAENGEYQVEEERIIFY
IGNIRAIIDHQILGVLASHEYELLVENHRRVVETMADGRAYIEQEAGGKVLLETSNHEEL
LVYFLENAKKGLGIQRYKGLGEMNPDQLWETTMNPENRVLLQVKIEDAVESDEIFTILMG
DQVDPRREFIETNALNVVNLDI
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgagtgaacacaacaacgtgacacagagcaacgttgaagagtacagtgccgataacatc
aaggtactggagggtctggccgcggtgcgcaagcgccccgccatgtacatcggctccacc
tccggtgcgggcctgcaccacctggtgtacgagatagtggacaactccatcgacgaggcc
ctggctggtcattgcgacaacatcagtgtcaccatcaatgtggacggctccgtaaccgtc
atcgacaacggccgcggcataccgacggatatgcatcccaccgaagggaggtcggctgcc
gaggtcgtcctgaccgtactgcacgccggcggcaagttcgataatgattcctacaaggtt
tccggcggtctgcacggcgtcggcgtctcggttgtcaacgcgctttcaaaatggctggaa
ctggagatcaagcgtgatggcaagatattccgccaatcctaccgccgtggcgatccggtt
gctcccctggccgagaccggcgcaaccaggaagcggggcaccaaagtcaccttcatgccc
gatgaggagattttcgagaccaccgagttctcctttgacgttctctcccagcgcctgcgc
gaactggcctttctcaacgccggcgtgcgcatcggcatcagcgacatgcgggtggacaac
aagtcccacgagttctactacgagggggggatcaactccttcgtcgagtacctgaatcgc
aacaagatcgccgtgcatcccaagccgatctacttccggggagagaaggggggggtggag
accgaggtctccatgcagtacaacgactccttcgacgagaaaatcttctcctttgccaac
aacatcaatacccacgaggggggcacccatctggtcggcttcaaggctgccctgacccgc
accatgaacgcctatgcggcggccaacaatctgctcaagaaggaaaaggtctccatctcc
ggtgacgacctgcgcgaggggctgacctgcgtcatctcggtcaaaatcccccagccccag
ttcgagggacagaccaagaccaaactgggcaactcggaggtcaagggatatgtggaatcc
atgatcaacgagaagctggcccagttcctggaggagaatccccaggtggccaagcgcatc
ctggagaaatccatcgaggcagcccgggcaagggaggctgcccgcagggcccgcgagacg
gtgcgacgcaagggcgccctggacctgggagggctgccgggcaaactggccgactgccag
gagaagaaccccgaacattgcgaactgtacctggtggagggtgactccgccggcggctcg
gccaaacaggggcgcgaccgcaagttccaggccatcctgccgctgaagggcaagatcctc
aacgtggagaagtcccgtttcgacaagatgatctcctcccaggagatccgcaccctgatc
accgccctgggcaccggcatcggcaaggatgatttcgatatctccaagctgcgctacggc
cggatcatcgtcatgaccgacgccgacgtggacggctcccacatcctgaccctgctctta
accttcttctaccgcaacatgaacgagctgatccagcgcggccatctgtacattgcccag
ccgccgctctacaaggtcaagcggggcaagaaggagatgtacctgaggaacgaagcggcc
ctgcagaacttcctgctggaggagggggccgaggacctggttctcaggctggagaagggg
gaccggaaatacctgggaaaacagatcatcccggtgatccgccagttcatcgacaaccgg
gccatcttcgacaaggtggtcaaaaagggaatttcccaggagttgctctccatcatcgtc
cgcagtaacgtgccggctggcctggaagagctttcccaggtagagccgtatctggaggcc
atgaaggaactggccgaaaacggggagtaccaggtggaggaggagcggatcatcttctac
atcggcaatatccgcgccatcatcgaccatcagatcctgggcgttctggccagccacgag
tacgaactgctggtggaaaatcaccgccgggtggtggaaaccatggccgacggccgtgcc
tacatcgagcaggaagcgggtgggaaggtgctgcttgaaacatccaaccatgaggaatta
ctggtatattttcttgaaaacgccaagaagggtctgggcatccagcgctacaaaggtctg
ggcgagatgaacccggaccagctctgggagaccaccatgaatccggagaacagggtgctc
ttgcaggtcaagatcgaggatgccgtggaatcggacgagatcttcaccatcctgatgggc
gaccaggtggacccgcgccgcgaattcattgagaccaacgcgctgaacgtggtcaacctg
gacatctaa

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