KEGG T00409: PEPE

Pediococcus pentosaceus: PEPE_1572

Entry

PEPE_1572 CDS T00409

Definition

DNA-directed RNA polymerase, delta subunit

Orthology

K03048

DNA-directed RNA polymerase subunit delta

Organism

ppe Pediococcus pentosaceus

Pathway

ppe00230	Purine metabolism
ppe00240	Pyrimidine metabolism
ppe01100	Metabolic pathways
ppe03020	RNA polymerase

Module

ppe_M00183

RNA polymerase, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:ppe00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:ppe00240]
Genetic Information Processing; Transcription; RNA polymerase [PATH:ppe03020]

SSDB

Motif

Pfam:

HARE-HTH DUF1914

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1542046..1542582)

AA seq 178 aa
MELENFKGQNKNELSMIEVAHAILAKSGEPMAFVDLANAVQSYLDKTDEEFRNRLSQFYT
DLNVDGSFISLGENTWGLRTWYPFESIDEALIHAEDEDEDRPVRKKRKKVNAFLADAADD
DDVIDYDSDDPEDEEVEAEDTTSDDAPAFEDLSNDDDTDVLPDGIEGQLSELNEDDEN

NT seq 537 nt +upstreamnt +downstreamnt
ttggaattagaaaattttaagggtcaaaacaaaaacgaactctcaatgatcgaagttgcc
cacgctattttagctaagagtggtgaaccaatggcttttgttgatttagccaacgcggtt
cagagttatttagataagacagatgaggaatttagaaatcgattatcacaattttatact
gatttaaacgttgacggaagttttatttccttgggcgaaaatacatggggacttcgtact
tggtacccattcgaatcaattgatgaagccttaattcacgctgaagatgaagacgaagac
cgtcctgtacgtaaaaaacgtaagaaggttaatgcctttcttgctgatgcagctgatgac
gatgatgtaattgactacgattctgatgatccagaagatgaagaagtcgaagctgaagat
actacatcagatgacgctccagcatttgaagatctttctaacgatgacgatactgatgtt
cttccagatggaattgaaggtcaactatcagaattaaacgaagatgacgaaaactaa

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF

DBGET integrated database retrieval system