KEGG   Pediococcus pentosaceus SL4: T256_03665Help
Entry
T256_03665        CDS       T02906                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppen  Pediococcus pentosaceus SL4
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppen00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    T256_03665
Enzymes [BR:ppen01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     T256_03665
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     T256_03665
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
741589..742416
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETVRRGLAALVEGKIVTNVVVRYSKMVSPKAEIFAEELEGKKILNVRRRGKYL
LIDFSGDYTMVSHLRMEGKYSVVDRHEEYGKHDHVIFELDDGKDLRYNDTRKFGRMNLVP
TGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQSMIAGLGNIYADEVL
WLSKIHPQQISNTLTDEEIAILRESIFEELQLAIEAKGTTVFSYLNADGHAGSFQNQLHV
YHRQGLPCQRCGTPIERIKVAQRGTHFCPHCQVLR
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaacagttcgtagaggcctagcagccttagttgaagga
aaaatagttactaatgttgtagtacgttattcaaaaatggtctcaccaaaagcggaaatt
tttgcagaagaactagagggtaaaaaaattcttaatgttcgacgacgcggtaaatatcta
ttaattgattttagtggagattacacgatggtttctcatcttcgcatggagggtaaatac
tctgtagttgatcgtcatgaagagtatggcaagcatgatcacgttattttcgagcttgat
gatggaaaagatcttcggtacaacgacactagaaaattcggtaggatgaatttggtaccc
acgggtgaggaattacaagtgggcggtttaaaaacgattggaccagaaccaacgcctgag
acccttaccttagaatatttaacccatcagctacggaatcgaaaacgtggaatgaaaagt
tttctattggatcagtccatgattgctggtttaggcaatatctacgctgatgaagtattg
tggctaagcaaaattcatcctcagcagatttctaatactttaactgatgaagaaattgca
attttgcgtgaatcaatttttgaagagttgcaattggcgattgaagctaaaggaacgacg
gttttttcttatttgaatgcggatggtcatgcgggaagttttcaaaaccagttgcatgta
taccatcgccaaggtttgccgtgtcagcgatgcgggacacccattgaacggattaaagtg
gcacaacgtgggacccatttttgcccccattgccaagttttgaggtag

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