KEGG   Prunus persica (peach): 18766461
Entry
18766461          CDS       T03092                                 
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
pper  Prunus persica (peach)
Pathway
pper03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18766461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18766461
Enzymes [BR:pper01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     18766461
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     18766461
SSDB
Motif
Pfam: CAF1 Spore_YpjB
Other DBs
NCBI-GeneID: 18766461
NCBI-ProteinID: XP_007201614
Position
G8:complement(18493440..18496906)
AA seq 614 aa
MASLPPLIRRRFLSTSTNVPKKWAVKEVTKLNFKESLEEFKDHLAGSNFVAVSLQKTGSF
SAAWHRPQPFDTADTSYCKAKYAAERFQLLQFAACPFTLRASKLTPHPYNFVLFPRDELK
LGMPSYSFSVQTSHLTSMAQEGFDFNACIYNGISYLSRAQESAAKVRIGNPSPSTYIMNS
SSTHTVADTVFLERIKSRVKHWKNACRSSKKDDALLSSLRKLVLGSELYGSRPCMNIDVC
SERQIQLALEMLREFSDELVPLIIPAKGGGTQAVRVVLTSSKEDKDSFERELQNLEEEQN
QRVRGFREVIDLISASQKPVVSHNALNDFTFIHSKFLSPLPTNVDEFMDSLHLVFPHLLD
VNHMMKNIGPLRKVTNIHAAISYLNNHYFAPIDMENLPQENEEGTVHRHNVVKMCYLFAK
LCSILKIPDNAMTSNNALLAPAPEEYTNISNPYPDSPQESINDDIRIWTKNMKKVSCNHL
VFLWGFRSGMTAGMLKSLLHKSHDVFSEEFDVRLVDKSCAIVVFWRPGLSETFLDFVSSE
EICGSLREIVSEGLRASSYEAYKRVCRLGLWEANLAESLDRALEDPDCLVEANLAANCKE
IYWSSDSTINFDNL
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggcgtctctgcctccactgatacggcgacgttttctcagcaccagcaccaatgtccca
aagaaatgggcggtgaaggaagtgacaaagttgaatttcaaggagtccctggaggagttc
aaggaccacctcgccggctcgaacttcgtagccgtctctctgcagaaaacggggtcgttt
tctgcggcttggcaccgtccccaacccttcgacaccgccgacacatcgtattgcaaggcc
aagtacgccgcagaaaggttccagcttcttcagttcgccgcctgccccttcactctcaga
gcctccaagctcactcctcacccatacaactttgtattgttcccaagagatgaattgaag
ctggggatgccatcttatagcttttcagttcaaacatcacatttgacttccatggctcaa
gaaggttttgattttaatgcctgcatatataatggtatatcatacttgtccagagcacaa
gaatccgcagctaaagtgcggatagggaatccaagccccagcacctatataatgaactct
tcttcgacccataccgttgctgatacagtttttcttgaaagaattaaatcacgagtcaag
cattggaagaatgcgtgtaggagttcaaagaaagatgatgctctgcttagttccttacga
aaacttgtcttggggagtgaactttatggatcaaggccatgcatgaatatagatgtttgc
agtgaacgtcaaatacagcttgcattggagatgttgagggagttctctgatgaacttgtt
cctttaataatcccagcaaagggtggaggaactcaggctgttcgtgtcgttctcacaagt
tctaaggaggacaaggactcgtttgagagagaacttcaaaaccttgaagaggaacaaaac
cagagagttcgggggtttcgagaggtgatcgatttgatttctgcttcacagaaacctgtt
gtctcccacaatgcccttaatgatttcacatttattcattcaaagtttctctcccccctg
ccgactaatgtagacgagttcatggactccttgcacttggttttccctcacttacttgat
gtcaaccatatgatgaagaatattggccctctaaggaaggtgaccaatatacatgcagct
atttcctacctgaataatcattactttgcacccattgatatggaaaacttgccccaagaa
aatgaagaaggcacagttcataggcataatgtggtgaagatgtgttatctgtttgcaaag
ctctgctccattctgaaaattccagacaatgctatgacatctaacaatgcactgttggct
ccagcccctgaagagtatacaaacatatccaatccgtaccctgacagcccccaagaatca
atcaatgatgatatcagaatctggacaaagaatatgaaaaaagtcagctgcaatcatttg
gtattcttatggggatttagaagtggcatgactgcggggatgctcaagagcttgttgcac
aagtcacatgacgttttctcagaagaatttgatgttcggttagtggacaagagctgtgct
attgttgttttctggcgacctggtttatccgaaactttcctggatttcgtgagtagtgaa
gagatttgtggatctttaagggagatagtttcggagggcctaagagcatcgagctatgag
gcttacaagagagtctgcaggttgggcttatgggaagcaaatttagcagagtccttagat
agagccttagaagacccagactgccttgtggaagctaatttggcagcaaactgcaaagaa
atctattggtctagcgactcaacgattaattttgacaacttgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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