KEGG   Prunus persica (peach): 18778124
Entry
18778124          CDS       T03092                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
pper  Prunus persica (peach)
Pathway
pper04120  Ubiquitin mediated proteolysis
pper04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18778124
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    18778124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pper04121]
    18778124
Enzymes [BR:pper01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18778124
Ubiquitin system [BR:pper04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    18778124
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     18778124
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 WD40_like zf-RING_2 zf-C3HC4_4 zf-RING_UBOX zf-RING_5 U-box DUF1664 zf-RING_10
Other DBs
NCBI-GeneID: 18778124
NCBI-ProteinID: XP_007210464
Position
G5:complement(3561511..3569543)
AA seq 668 aa
MEECSTGALVPAVKPEPKPSSIEASADPGSNDVDRPTHEKGLMEVDKDLLCPICMQLVKD
AFLTACGHSFCYMCIITHLRNKSDCPCCAQFLSTNQLFPNFLLDKLLKKASARQISKSAS
PVEHFRQALQQGCEVSIKELDTLLTLLAEKKRKMEQEEAERNMQILLDFLNCLRKQKVEE
LNEVQTHLQFIKEDIGAVERRRMDLYRARDRYSVKLRMLGGDDSISGARKSWPSSIDNNT
SSLSGRAGMSSWNLQPKKLDGWGLQKKDALSASDSQYMTQSGLAVARKKRVHSQFDELQE
CYLQKRRQMANQPYTQQERDKNVMQREGYTTGLADFQSVLTTLTRYSRMRVIAELRHGDL
FHPANIVSSIEFDRDYELFATAGVSRCIKVFDFSSVVNDPADVHCPVVEMPTRSKLSCLS
WNKFTKNHIASTDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSCTEPTRLVSGSDDCK
VKVWCTRQETSVLDIDMKANICCVKYNPGSSNCIAVGSADHHIHYYDLRNPSQPLHVFTG
HKKAVSYVKFLSNYELASASTDSTLRLWNVKENIPVRTFKGHTNEKNFVGLTVNGEYIAC
GSETNEVFVYHKEISKPVTWHRFGSPDLDDTDDDAGSYFISAVCWKSDSPTMLTANSQGT
IKVLVLAA
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggaggagtgctcgactggggctctagtcccggcggtgaaaccagaaccaaagccatca
agcatcgaggcttcggctgatccagggagcaatgacgtggatcgtccaactcatgagaaa
ggattgatggaggtggacaaggatttgttgtgtccaatttgcatgcagctggtaaaggat
gccttcctcacagcatgtggtcacagcttctgctacatgtgcatcattacccacctccgc
aacaagagtgactgcccttgctgcgcccagttcctcagcaccaatcaattgttccccaat
ttcctgctggataagcttctgaagaaggcatcggctcgtcaaatttccaaaagtgcgtcc
cctgtggagcattttcgtcaggcattgcaacagggatgtgaagtgtccatcaaggagcta
gacaccctattgacactcctggcggagaagaagaggaaaatggaacaagaagaggcagag
agaaatatgcaaatactgcttgacttcttgaattgcctaaggaagcaaaaagttgaagag
cttaatgaggtgcaaacccatcttcaatttattaaagaggacataggtgcagtagagaga
cgcagaatggacttgtaccgtgcgagggacagatactccgtcaagctgcggatgcttgga
ggggatgattctatttctggtgcaagaaagtcatggccttcctccatagataacaatacc
agttctctcagtgggcgagcagggatgtcttcatggaatcttcaacctaagaaacttgat
ggctggggacttcagaaaaaggatgctttaagtgcatcagactcccagtatatgactcaa
tctggtcttgctgtagccagaaagaagcgggtccattcacagtttgatgaactacaagag
tgctacctgcaaaagcgacgccagatggcgaaccaaccatatacccagcaagaacgggac
aaaaatgtgatgcaaagagaaggttacactacaggccttgctgattttcaatcagtgctt
accacgttaacacggtatagtcggatgagggtcattgctgaacttaggcatggagatcta
tttcacccagccaatatagtatcaagcattgaatttgaccgtgattatgaattgttcgct
actgctggggtttcacggtgcataaaagttttcgacttctcctcagttgtgaatgatcca
gctgatgtgcattgtcctgttgtggagatgcctacacgttcaaagcttagttgcttgagc
tggaacaagtttacgaaaaaccatatagctagtactgattatgagggaatagtaacagtt
tgggatgtaaatactcggcaaagtgtcatggagtatgaagagcatgaaaaacgtgcttgg
agtgttgatttttcatgcacagagcccacgaggcttgtatctggtagtgatgattgtaag
gtaaaagtttggtgcacaaggcaggaaactagtgttcttgacattgacatgaaagcaaac
atttgttgtgttaagtataatcctggatccagcaactgcattgcggttggttcagcagac
catcacatccactattatgatttaagaaatccgagccagccactccatgtgttcaccggg
cacaagaaagctgtttcttatgtgaaattcttgtcaaactatgagcttgcctctgcatcc
actgatagcacattgcggttatggaatgtgaaggaaaatattccagttcgtacgtttaaa
ggtcacacaaatgagaagaacttcgtaggtcttacagtaaacggggaatacattgcttgt
ggcagtgaaacgaatgaagtgttcgtgtatcataaggaaatctccaaacctgtgacttgg
catagatttggatcgcctgatttggatgacaccgatgatgatgcagggtcttacttcatc
agtgctgtatgttggaagagtgatagccctaccatgctaactgctaacagtcagggaacc
attaaagtgctggttcttgctgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (33)   

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