KEGG   Prunus persica (peach): 18782775
Entry
18782775          CDS       T03092                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
pper  Prunus persica (peach)
Pathway
pper04120  Ubiquitin mediated proteolysis
pper04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18782775
   04120 Ubiquitin mediated proteolysis
    18782775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pper04121]
    18782775
Enzymes [BR:pper01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18782775
Ubiquitin system [BR:pper04121]
 Ubiquitin ligases (E3)
  U-box type E3
   18782775
SSDB
Motif
Pfam: Ufd2P_core U-box Sec20
Other DBs
NCBI-GeneID: 18782775
NCBI-ProteinID: XP_007214914
UniProt: M5X3L3
Position
G3:24595564..24602251
AA seq 1028 aa
MATPKPQRSREELEDIVLRKIFLVSLTDSSESDSRIVYLEMTAAEILSEGKELRLTRDLM
ESILIDRLSGDFASAEPPFQYLIGCYKRAYDEGKKIAAMKDKNLRSELESVVRQAKKLSV
SYCRIHLGNPDSFSNPNKSNASPLLPLIFSEGGGSVDGFGVSGSGGGIQCPPGFLDEFFT
DPDFDSLDPILKGLYEELREIVLKVSALGNFQQPLRALYFLVKLPVGARSLVNHPWWIPK
GVYLNGRVIERTSILGPFFHVSALPDHPIFKSQPDVGQQCFSEASTRRPADLLSSFTTIK
TVMNNLYDGLAEVLLLLLKNADTRENVLEYLAEVINKNSSRAHIQVDPLSCASSGMFVNL
SAVMLRLCEPFLDANLTKRDKIDPKYVFYSNRLELRGLTALHASSEEVTEWINKDNMGNP
DGSRHSGDGENRLLQSQEATSSGNSVNVNPSNEKAKYSFICECFFMTARVLNLGLLKAFS
DFKHLVQDISRSEETLATLKNMQGQSSSPQLEMDLARLEKEIELYSQEKLCYEAQILRDG
TLIQSALSFYRLMVVWLVRLVGGFKMPLPLTCPTEFASMPEHFVEDAMELLIFASRIPKA
LDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSSITSTLFEGHQLSL
EYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHQNAWKQIAREEEKG
VYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQEN
IIRIDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDP
EKYEFRPKQLLKQIVYIYVHLAKGDTENIFPAAISKDGRSYNEQLFSAAADVLRRIGEDG
RVIQEFIELGAKAKVAASEAMDTEAVLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPV
IQRHLLSDNSDPFNRSHLTADMLIPDNELKGRIQEFIRSQELKKRGEDLSMQSSKATIQT
TTSEMLID
NT seq 3087 nt   +upstreamnt  +downstreamnt
atggcgaccccgaaaccccagaggtcccgggaggagttggaggacatagtcctccggaaa
atctttctcgtatcgctgaccgattcctccgaatccgattcccgaatcgtttacttggag
atgactgcagcagagattctgagcgagggcaaagagttgaggctcactcgggacctcatg
gaatcgattctaattgatcggctttcgggcgattttgcctctgctgaaccgcctttccag
tacctcatcgggtgctacaaacgggcttatgacgagggtaagaagatcgctgccatgaaa
gataagaacttgaggtctgaattggaatctgtggttagacaagccaagaagctatcggtt
tcgtattgtaggattcatttggggaacccggattcgttttccaacccgaataagtcaaat
gcgtcgcctttattgcccttgattttttcagagggtgggggctcagttgatgggtttgga
gttagtggtagtggtgggggaatccagtgcccacctgggtttttggatgagttcttcacg
gaccccgatttcgatagcttggacccgattttgaaagggttgtatgaggagcttagggag
attgtgcttaaggtttcggccctcggaaacttccagcagccattgagggctctgtatttt
ttggttaagttaccagttggtgcaaggtctcttgtcaatcacccttggtggattcccaaa
ggggtatacttgaatgggcgagttattgaaaggactagcattttaggtcctttcttccat
gtcagtgctctgccggatcatccaattttcaagagccagcctgatgtcgggcagcagtgc
ttttcagaagcttcaactcggcgaccagctgatctgctctcctcattcaccacaattaag
acagtcatgaataatttatatgatggccttgccgaagttcttctcttacttctgaaaaat
gcagacacccgtgagaatgttcttgagtatcttgcagaggtgatcaataaaaactcatca
agggctcatattcaggtggatcctctttcatgtgcaagttcaggcatgtttgtcaatctc
agtgctgtcatgcttcgtctttgtgagccgtttttagatgcaaacttaacaaaaagggac
aaaattgatccaaaatatgtattttacagtaaccgtctggagttaagagggttgactgcg
ctacatgcatcatctgaagaagttactgaatggattaacaaagataatatggggaatcct
gatggctctagacacagtggtgatggtgaaaatcgccttttacaatctcaagaagccacc
agttctggaaatagtgtcaacgtgaacccaagcaatgaaaaagctaaatattcatttatt
tgtgaatgcttcttcatgactgcaagggtgctcaatctgggtttgctgaaagcattttct
gactttaaacatttagtacaggatatttcaaggtctgaagagactctcgccacactcaaa
aacatgcaaggccagtcatcttctccacagttagagatggatttagctcgccttgagaaa
gaaatagagttgtattcacaggaaaagctttgttatgaagctcagatactaagggatggt
acacttatacagagtgctctttctttctaccgattgatggtggtgtggctagttcgcttg
gttggtggatttaaaatgcctctgcccttaacttgccctacggagtttgcttctatgcca
gagcattttgtggaagatgccatggaattgcttatatttgcttcccggattcccaaagct
ttggatggagtcttgttggatgattttatgaacttcattataatgttcatggcaagtcca
gaatatatcaggaacccttatctaagagcaaagatggttgaggtcctgaactgctggatg
cctcgcagaagtggatcatctattacttctaccctatttgaagggcaccaactgtctctt
gagtatctcgtgaggaatctcttgaagctatacgtcgacatcgagttcactggttctcac
acacagttctatgacaagtttaacatccgccacaatatcgctgaacttcttgaatatctg
tggcaagtccctagtcatcaaaatgcttggaaacagattgctagggaagaggagaagggc
gtttacttgaatttcttaaacttcttgatcaatgatagcatctatcttctggatgaaagt
cttaacaaaattctggaactcaaagaactagaagctgagatgtcaaacactgcagaatgg
gaacgcaggcctgctcaagagaggcaggagaggacccgcctattccattctcaagagaat
attatccgaattgatatgaagttggcaaatgaagatgtgagtatgctggcatttactaca
gaacagattacagctcctttcctacttcctgagatggttgaaagggtggccagcatgctc
aattactttttgttgcaattagtaggccctcaaagaaagtctcttagtttgaaagaccct
gagaagtatgaattccggccaaagcaattgcttaagcagattgtatacatatacgttcat
ttggcaaagggtgatacagaaaatatttttccagctgccatctcaaaggatggtaggtca
tacaatgagcagttgtttagtgctgcagcggatgtcctaaggagaattggagaagatggg
agggtcatacaggaatttattgagcttggtgccaaagccaaagttgctgcttctgaggcc
atggacacggaagctgttctcggggacataccagatgaattccttgatccaattcagtac
actttaatgaaggatccagttatcttgccttcttcaagaatcacggtagaccgacctgtc
atccaaaggcatcttcttagtgataattcggatccgttcaaccgctcccatcttacggcg
gacatgctgataccagacaatgaattgaagggaagaatacaagagttcattaggtcccaa
gaattgaagaagcgcggggaagacctaagcatgcagagcagcaaggcaaccatacagacc
acaactagcgaaatgctaattgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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