KEGG   Prunus persica (peach): 18786216
Entry
18786216          CDS       T03092                                 
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1 isoform X1
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pper  Prunus persica (peach)
Pathway
pper03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    18786216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pper03400]
    18786216
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     18786216
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SAWADEE ResIII
Other DBs
NCBI-GeneID: 18786216
NCBI-ProteinID: XP_007218889
UniProt: M5XF02
Position
G2:complement(26856147..26863848)
AA seq 1312 aa
MCLTAVHFFLFCFCCRYLTVIVGRRRNSGTNWLIKMKRKRHLYRSTHPFDAYPFEALCCG
SWHPVELLGIRSGTMTINFADNHSCVIQNKGPFPNIRVRSRQANSYDCTCFLRPGVDVCV
LSTPENTENSEEKIRAPVMVDARINSIKRVPHESHCSCRFYVNFYVNQGPLGSERATLNK
DAKRVGIHDIFVFQTLDRDSCANEHYRWEFSADCPTLPRTKLLLGKFLSDISWLLVTSVL
KQVSFDVRSVQRKVVYQIVGGDDDSTLSKSDNYLHAVNFRVDDGLLVPIVVEFVPADATG
NDPTEGGPSSSSDLLGLRRSKRQNVRPERFLGCDAPAEIEIGYIRSRPYKVDHSDDDDMH
IPLSQLFGKHARRSEEHTEAEQKVHYKKLKSSEDLHASKSEDDLASESEDSLECKSKIKS
RKVKSDVAKRKKHQAQLAIVPLPDKRDPFALGRSHLNANSPEKSTKEGEEFPAKYYYHYS
SKAKRKKNSDLDDMDFQMKWDGKVSTSRASRVYNNRHNSIRSKREGLSGRTYPKRSLSAG
AYKELINTFLKDMDCSNKQEPNIMDQWKEFKAGKNPEQQNETEMPEDEDEEEMSETEMLW
KEMELALASAYLLDGDEGSQGSTSGGTAQKSGAGCRHEFRLNEEIGMVCLICGFVSIEIG
DVSAPFVQNTGWAADDRKINEEQTDDKRAEYEEFNFFHTRTSPDEPEPLSEENDNVWALI
PELRRKLLFHQKKAFEFLWKNVAGSLEPALMEHKAKKIGGCVISHSPGAGKTFLIIAFLV
SYLKLFPGKRPLVLAPKTTLYTWYKEFIKWKIPIPVYLIHGRRTYRVFKKKTVTFTGGPK
PTDDVLHVLDCLEKIQKWHAQPSVLVMGYTSFLTLMREDSKFVHRKFMAQVLRESPGIVV
LDEGHNPRSTKSRLRKGLMKVETDLRILLSGTLFQNNFCEYFNTLCLARPKFVNEVLRQL
DPKYRRKKKGKEKARHLMEARARKLFLDQIAKKIDSNEGEDQRIQGLNMLRNITNGFIDV
YEGGNSDTLPGLQIYTLLMNTTDIQQEILDKLQDIMSKYHGYPLELELLITLGSIHPWLI
KTAACADKFFTTEQLEDLEQYKHDLHKGSKVKFVLSLIYRVVRKEKVLIFCHNIAPVRLF
LELFEMVFGWQRGREVLVLTGDLELFERGKVMDKFEEAGGASRVLLASITACAEGISLTA
ASRVILLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLATGTLEEDKYGRTTWKEWVSSM
IFSEAFVEDPSRWQAEKIEDDILREMVAEDKSKSFHMIMKNEKASTVVRGKD
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtgtctaacagcagtgcatttttttttgttttgtttctgttgcagatatttgacagtg
attgtagggcgtaggagaaattcgggtaccaattggctaatcaagatgaagaggaagaga
catctgtaccgatctacccatccatttgatgcttatccttttgaggctctttgctgcgga
tcatggcatcctgtggagcttctaggcatcaggagtggaaccatgacgataaatttcgca
gacaatcattcatgtgtcattcaaaataaaggcccattcccgaacattcgagtgaggtca
agacaggcaaattcatatgactgcacctgctttttgcggcctggtgttgatgtatgcgtg
ctttcaactcctgaaaatacagaaaactcagaagagaaaattcgagctcctgtgatggtt
gatgctcgaatcaattcaatcaagagggtgcctcatgagtcccattgctcatgtcgcttt
tacgttaacttttatgtgaaccaaggccctcttggttcagaaagagcaacccttaacaag
gacgctaaacgtgttggaatccatgacattttcgtcttccaaacacttgatcgtgattct
tgtgcaaatgagcactaccgatgggagttctctgcagactgcccaacgctgcccagaacg
aaattgctgttggggaaatttttatcagacatttcatggttgcttgtgacatcagtgctg
aagcaggtttcatttgatgtaagatcagtacaaagaaaagtggtgtaccaaattgtggga
ggtgatgatgacagcactctgtcaaagtctgacaattatttacatgctgtcaacttcaga
gtagacgacgggctcctggtaccaatagtagttgaatttgtaccagctgatgctaccggg
aatgatcctactgaaggtggaccatcatcatcttctgatcttttgggcctgcgacgttcc
aagcgtcagaatgttcgacctgagcgtttccttgggtgtgatgctccagcagagatagag
attggatatattcgtagcagaccatataaagtagatcactcagatgatgatgatatgcat
ataccactttcacagttgtttggaaaacatgcgagacgttcagaagagcatactgaggca
gagcaaaaggttcattataagaaattaaagtccagcgaggatctccatgcatccaaaagt
gaggatgatcttgcaagcgaaagtgaggattcccttgaatgcaaaagcaagattaagtcg
aggaaggtgaaatcagatgtggctaaaaggaagaaacatcaagctcaacttgcaattgtt
cctctgcctgacaaaagggatcctttcgcccttggacgcagtcatctaaatgccaatagt
cctgaaaagagtacaaaagagggtgaagaatttcctgcgaagtattattatcattacagt
tctaaagcaaagagaaagaagaattctgacttagatgatatggactttcaaatgaaatgg
gatggaaaagtatccactagcagagctagcagagtttataacaacaggcataactccata
cgctcgaaaagggagggtctcagtggaagaacttacccaaagaggagcttaagtgcaggt
gcctacaaggaactgataaatacgtttttgaaagacatggattgctcaaataagcaagag
ccaaatattatggaccagtggaaagaatttaaggctggaaagaaccctgagcaacagaac
gaaactgaaatgcccgaagatgaggatgaggaggaaatgtccgagactgaaatgctgtgg
aaagaaatggaattagcactggcatcagcttaccttcttgatggtgatgagggatcacaa
gggagcacgtcaggtgggactgcacaaaagtctggtgcaggttgccggcatgaatttaga
ttgaatgaagaaattgggatggtgtgcctcatatgtggtttcgtcagcatcgaaatagga
gatgtttcggccccctttgtgcaaaacacagggtgggccgcagatgatagaaagatcaat
gaagaacaaacagacgataagcgagctgaatatgaggaattcaatttcttccacactcgt
acttcccctgatgagcctgagcctttatcagaagaaaatgacaacgtttgggccttaatt
cctgaacttagaaggaaattgttattccaccagaagaaggcttttgagtttctgtggaaa
aacgttgcaggatctttggaaccagcacttatggaacataaggccaagaaaataggtggc
tgtgttatatctcattctcctggagctggaaaaacttttctgatcattgcatttcttgtt
agctacctcaagttattcccaggaaaacggcctctggtccttgctccgaagacaacactc
tatacgtggtacaaagaatttattaaatggaaaattcctataccagtgtatctaattcac
ggccgtagaacctacagagtgttcaagaagaaaacagtgacctttactggaggcccgaag
ccgacggatgatgtgttgcatgttttggattgcctagaaaaaatacagaagtggcatgca
cagccaagtgttcttgtcatgggttatacttcattcctaacattgatgcgtgaagactca
aaatttgtgcacagaaaattcatggctcaagtgctgcgggagagtcccgggatcgtagta
ctagatgaagggcacaaccccagaagtactaaatcaaggttgaggaagggattgatgaaa
gttgaaacggacttgagaatattgctatcaggtactctgtttcagaacaacttctgtgaa
tacttcaacaccctgtgtttggcaagaccaaagtttgtgaatgaagttttaaggcaattg
gacccaaaatacagaaggaaaaagaaaggtaaggaaaaagcgcgccatttgatggaagcc
agagcacgaaagttgttcttggaccagattgccaagaagattgattcgaacgaaggtgaa
gatcaaaggatccaaggtctaaacatgttgagaaatataacaaatggattcatagatgtg
tatgaaggtggaaattcagacacccttcctggtctgcagatttacaccttgttgatgaac
actactgacatacagcaagagattttggacaaactgcaagacataatgtccaaataccat
ggctaccctctggagctggaacttttgattacccttggatcaatacatccttggctaatc
aaaactgcagcttgtgctgataagttttttactactgagcaactagaggatcttgagcag
tacaagcatgatttgcacaaagggtccaaggtcaagtttgttttgagccttatttacagg
gttgtccggaaggagaaggttttgattttctgtcacaacattgcacctgtgagactgttt
ctagaactgtttgaaatggtgtttgggtggcagagaggcagagaagtcttggttctcaca
ggggatttggagctgtttgagcgcggaaaggtgatggacaagtttgaagaggctggtgga
gcctcaagggtcctgcttgcatcaatcacagcttgtgctgagggaattagtttgacagca
gcttctcgggtcatcttgctggactccgaatggaacccttcgaagacgaagcaggccatt
gcacgagccttccgtcccggtcagcagaaggtggtgtatgtttaccagctcttggcaact
ggaactctcgaagaagacaagtatgggaggacaacttggaaggagtgggtgtcaagcatg
attttcagtgaggcattcgtggaggacccgtcccgctggcaagcagagaagattgaagat
gatatattgagggagatggtggcagaggacaagtctaaatcattccatatgatcatgaag
aatgaaaaggcttcaactgtggtcagaggtaaggactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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