KEGG   Prunus persica (peach): 18787440
Entry
18787440          CDS       T03092                                 
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
pper  Prunus persica (peach)
Pathway
pper03013  Nucleocytoplasmic transport
pper03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18787440
   03015 mRNA surveillance pathway
    18787440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pper03019]
    18787440
   03036 Chromosome and associated proteins [BR:pper03036]
    18787440
Messenger RNA biogenesis [BR:pper03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     18787440
Chromosome and associated proteins [BR:pper03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     18787440
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 18787440
NCBI-ProteinID: XP_007218562
UniProt: M5X2P5
Position
G2:complement(20580301..20583057)
AA seq 148 aa
MAGVAQAPKRALAPQGRGLRSPPRPRFAPVDREKTCPLLLRVFTKVGSHHTNEDFAVRGK
EPKDEVQIYTWKDANLRELTDLVKEVAPAARRRNAKLSFAIVYPDRHGHFVVKEVGRTLS
YGNGRLDDAKVLAELGFAIGDYLDVAIM
NT seq 447 nt   +upstreamnt  +downstreamnt
atggctggagtagcccaagcgccgaagagagcactagctccacagggaagaggtcttcgc
tctcctcctcgccctcgctttgcgccagtcgatcgcgaaaagacttgtcccctgttgctt
cgagttttcactaaggttggaagtcatcataccaatgaagattttgcagtgagaggaaag
gagcctaaggatgaagttcaaatttatacatggaaagatgctaatcttcgcgagttaact
gatctggtgaaagaggttgctcctgcagctagaaggagaaatgcgaaactgtcctttgct
attgtatatccagataggcatggccatttcgtggtcaaagaggtggggaggacgctttct
tatggaaatggaagattagatgatgccaaagttttggctgaacttggctttgcgattgga
gattacttggatgtggcgattatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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