KEGG   Prunus persica (peach): 18790721
Entry
18790721          CDS       T03092                                 
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
pper  Prunus persica (peach)
Pathway
pper03410  Base excision repair
pper03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    18790721
   03450 Non-homologous end-joining
    18790721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pper03400]
    18790721
Enzymes [BR:pper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     18790721
DNA repair and recombination proteins [BR:pper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     18790721
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     18790721
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT Cdd1 HHH_5 NTP_transf_2 PTCB-BRCT BRCT_2
Other DBs
NCBI-GeneID: 18790721
NCBI-ProteinID: XP_007226258
UniProt: M5XMY2
Position
G1:complement(26908015..26912700)
AA seq 501 aa
MAPKTTRNQSPPSDPQGMFAGLVVFLVEKRVQSRRLQIWKQKLVQMGATIEDSLTKRVTH
ILAMDPEALLQQLGSERLAHFKGTVVVYQWLEDSLSSGEKVSEDMYHLKLEADKSSNDYI
SSDDEPPKPKKLRSSSPDDLAHTSIPKTPESPNKDQITALQSAVPYNPPDLNKNITQIFG
KLINIYRALGDDRRSFSYYKAVPVIEKLPFKIQSVDQVKDLPNIGKSMQDHIQEIVTTGK
LSKLEHFETDEKVRTLALFEEIWGVGPATALKLYEKGHRTLDDLKNEDSLTNSQKLGLRY
YDDIKQRIPRHEAEEMEHLLQKVGENVLPGVVIVCGGSYRRGKASCGDLDIVITHPDGTS
HKGFLPKYVKQLKDMKFLREDLIFSTHSEEGTDSGVDTYFGLCTYLGRELRHRIDLKVYP
LEIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLFPATHGSSGSKRGVRASASLKFD
TEKEVFDFLGFPWLEPHERNL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggcgccaaagacaaccagaaatcaaagtccaccgtccgatcctcagggaatgttcgct
ggattggtcgtattcttagtcgaaaaacgagttcagagccgtcgtttacagatttggaag
caaaaattggtccaaatgggggctacaatcgaagacagcctaaccaaaagggtcactcac
atacttgctatggacccagaagccctcttacaacaactgggtagtgagcgcttggcgcac
tttaaaggaacagttgtagtttatcagtggctagaggatagtttgagctcaggagagaag
gtatctgaggatatgtaccatctaaaattggaagcagacaagtcttccaatgattacatt
tctagcgatgatgaaccgccaaaacccaaaaagctaagatcatcttctcctgatgacttg
gctcacacttcaatacccaaaacccctgaatctccaaataaggatcagatcactgcattg
cagtcggctgtgccctacaacccacctgacttgaataagaacataacccagatattcggg
aaacttatcaatatttatagagccttgggtgatgaccgaagatcgtttagctattacaag
gctgtaccagttatagagaagttgcctttcaagattcaaagtgtggaccaagttaaagac
ctacccaacattggaaagtctatgcaagatcatattcaggagatcgtgactactgggaag
ttatccaagttggagcactttgaaacagatgaaaaggtacgaacactcgccttatttgag
gaaatttggggtgttggtccagctactgcactgaaattatatgagaaaggacaccgcacg
ttagatgatttgaagaatgaagattcattaacaaattcgcaaaagttggggttaagatat
tatgacgatatcaaacagaggatcccacgccatgaggctgaagagatggaacatcttcta
cagaaagttggagagaatgttttgcccggggtggtcattgtatgtggtggatcatataga
cgcgggaaagcttcttgtggggatctagacattgtaattacacatcctgatggaacgagt
cataaaggttttctaccaaaatatgtaaagcagttaaaggatatgaagttcctacgagag
gatttgattttcagtacgcatagtgaggagggtactgattctggcgttgacacatatttc
ggactttgcacatatctaggaagagagttgcgacatcgcatagatcttaaggtttaccca
ttggagatatatgcatttggactaatagcttggacagggaatgatgtattgaataggagg
ttgagattactagctgaatctaaaggattccggcttgatgatacagggttgtttccagct
actcatggctcttccggcagtaaacggggggtgagagctagcgcaagcttgaaatttgac
acagaaaaggaggtgtttgatttccttgggtttccttggcttgaaccacatgagagaaat
ctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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