KEGG   Pseudomonas putida F1: Pput_1599
Entry
Pput_1599         CDS       T00537                                 
Name
(GenBank) DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ppf  Pseudomonas putida F1
Pathway
ppf03030  DNA replication
ppf03430  Mismatch repair
ppf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pput_1599
   03430 Mismatch repair
    Pput_1599
   03440 Homologous recombination
    Pput_1599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppf03032]
    Pput_1599
   03400 DNA repair and recombination proteins [BR:ppf03400]
    Pput_1599
Enzymes [BR:ppf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pput_1599
DNA replication proteins [BR:ppf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pput_1599
DNA repair and recombination proteins [BR:ppf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pput_1599
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_5 AAA_22 ResIII AAA_14 TIP49 AAA_30 AAA_19 PIF1 AAA_16 AAA_18 AAA_2 TsaE nSTAND3 AAA_7 HasA SKI Rad17 Herpes_Helicase zf-CXXC AAA_24
Other DBs
NCBI-ProteinID: ABQ77755
UniProt: A5W0U5
Position
1790111..1792189
AA seq 692 aa
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLAAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPTGISQATADPAGQVAAAAPVALSSPVAAVPAEPVAQAPQLEVPAPAT
ADHEPEAEADVELKAEAEAISVPEPVAEVVDLPWEEPAVLPAPLAAEPAPEPAPAEPEPV
APVAPPQATPAHDEPPFDPSAYAAVGMERDDEPPLDEDYYGGESDPAGFSYLDELAEHVQ
EDVSKPAAEPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAADGDDWLLHLDP
GQGALFNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVASIE
QDPLIQQMIKLFGAKVRQDTIEPVEALASQGQ
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgagttatcaggttcttgcacgaaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggccttgatcaatgccttggacaaccagcgcctgcaccatgcc
tacctgttcaccggtacccgcggcgtgggcaagacgaccatcgcccgtattatcgccaag
tgcctgaactgtgaaaccggcatcacctccacgccctgtggcacctgttcggtgtgccgt
gaaatcgacgaaggccgtttcgtcgacctgatcgagatcgacgccgccagccgtaccaag
gtcgaggacactcgcgaactgctcgataacgtgcagtacgcccccagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgacccactcgttcaacgccttgctc
aagacgctggaagagccaccgccctacgtcaagttcatcctcgccaccaccgatccgcag
aagctgccggccactatcctgtcgcgctgcctgcagttctcgttgaagaacatgagcccg
gagcgggtggtggagcacctcagccacgtactggccgccgaaaatgtgccgttcgaggaa
gatgccctgtggctgctgggccgtgcggccgatggttccatgcgtgatgccatgagcctg
accgaccaggccatcgcctttggtgaaggcaaggtactggccgccgatgtacgtgccatg
ttgggtagcctcgaccatggccaggtgtatggggtcttgcaggcactgctcgaaggcgat
gccagggctttgctggaggccgtgcgtaatctggccgagcaagggccggactggtcgggc
gttctggccgaaatgctcaatgtgctgcaccgtgtagccattgcccaggcgctgcccgaa
gcggtagacaacggccagggtgatcgcgagcgggtattggcgctggcttcggcgctgccg
gccgaggatgtgcagttttattatcagatgggcctgattggccgccgtgatctgcccctt
gcgccggatccgcgcggtgggttcgagatggtgctgctgcgcatgctggcgttccgcccg
gcagacacggacgatgcaccgaagccggtgctaaagccaacggggatcagccaggccaca
gctgatcctgcagggcaggtggcagccgcggcgccggtcgcgctttcatcgcctgtcgcg
gctgtgccggcggagcctgtagcgcaagccccgcagctggaggtgcctgcacccgcgacg
gctgatcatgagccggaggccgaggcagatgttgagctgaaggccgaagccgaggccatc
tccgtacctgagcctgttgccgaagtggtcgacttgccgtgggaagagcctgccgtttta
cccgcgccgttagcggctgaacccgcgcctgaaccggcacctgccgagcccgagcctgtt
gccccggtggcgcccccacaggccaccccggcacacgacgagccgcctttcgacccgtct
gcctacgctgccgtggggatggagcgcgacgatgagccgccgcttgacgaagactattac
ggcggcgaaagcgatccggcaggcttcagctacctggacgagctggccgaacatgttcag
gaagacgtgtccaaaccggcggccgaaccgttgccggcagccaaaccggccaccggtctg
gccctgcaatggctggaattattcccacagttgcctgtgtccgggatgacaggcaacatc
gcggcaaactgtacgctgattgccgccgatggcgacgactggttgctgcatctggacccg
ggccagggtgcgttgttcaacgccacccagcagcggcgcctgaacgaagcgctcaaccag
cacttggggcgcacgctgaacctgcgcatcgagctgatcctgcccgagcaggaaaccccg
gctcaggccgcagcgcgcaagcgtgccgagcgccagcaggacgccgtcgcgtcgatcgag
caggatccgttgatccagcagatgatcaagttgttcggcgccaaggtgcggcaggatact
attgagcctgtagaagccctggccagtcagggccagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (38)   

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