KEGG T00537: Pput

Pseudomonas putida F1: Pput_1821

Entry

Pput_1821 CDS T00537

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

ppf Pseudomonas putida F1

Pathway

ppf00020	Citrate cycle (TCA cycle)
ppf00480	Glutathione metabolism
ppf01100	Metabolic pathways
ppf01110	Biosynthesis of secondary metabolites
ppf01120	Microbial metabolism in diverse environments
ppf01210	2-Oxocarboxylic acid metabolism
ppf01230	Biosynthesis of amino acids

Module

ppf_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ppf_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppf00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:ppf00480]

SSDB

Motif

Pfam:

IDH DUF4115

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2090547..2092850)

AA seq 767 aa
MALPGRCAYPAHHETRARSAHRELTRMPTRSKIIYTFTDEAPALATYSLLPIIEAFTASA
DIAVETRDISLAGRILAAFPEQLGAEKQVGDHLAELGQLATTPEANIIKLPNISASVPQL
KAAIKELQGKGFNIPDYADEPATAEEKESRARYDRIKGSAVNPVLREGNSDRRAPLSVKN
YARKHPHKMGAWAADSKSHVAHMTQGDFYGSEKAALIEADDSLRIELVAKDGSTTVLKEK
TAVKAAEVIDCATMSRKALKAFIAEQIADAKAAGVLLSVHLKATMMKVSDPIMFGVIVEE
FYNDVLTKHAAALAEVGFNANNGIGDLYARIKDLPADKQAEIEADIQALYAERPALAMVN
SDKGITNLHVPSDVIVDASMPAMIRDSGKMWNTAGELQDAKAVIPDRCYAGIYQATIEDC
KVNGAFDPTTMGSVPNVGLMAQKAEEYGSHDKTFQVKADGVVRVVDGKGNVVLEQNVEAG
DIFRMCQTKDAPIQDWVKLAVNRARLSNTPAVFWLDPARAHDGVMIEKVQKYLKDHDTTG
LDIRILAPVDAIKFSLARIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMS
GGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGNTYDNPRAKVLANTL
DQATGKFLDTNKSPSRKVGGIDNRGSHFYLTLYWAEALAAQTDDAALQARFAPLAKTLAE
NEATIVAELNAVQGKPADIGGYYAPDAELTAKVMRPSQTLNSAIAAL

NT seq 2304 nt +upstreamnt +downstreamnt
atggcgctgccagggcgatgcgcctaccctgcgcaccacgagactcgagcacgctcagca
cacagagagttaacccgcatgcccacccgttccaagatcatctataccttcaccgacgaa
gcccccgccctcgccacttactcgctgctgccgatcatcgaagcgttcaccgcttcggct
gacatcgctgtcgaaactcgcgacatctccctggctggccgtatccttgccgccttcccg
gagcaactgggcgcagagaagcaagtaggcgatcacctggcggaactgggccagctggct
accacccctgaagccaacatcatcaagctgccgaacatcagcgcctcggtaccgcagctc
aaagccgcgatcaaggaactgcaaggcaagggcttcaacatccctgactacgccgacgag
ccggccaccgcggaagaaaaagaatcccgtgcccgctacgaccgcatcaaaggttccgcc
gtgaacccggtgctgcgcgaaggcaactccgaccgccgcgcgccactgtcggtcaagaac
tacgcccgcaagcacccacacaagatgggcgcctgggccgccgactccaagtcgcacgtt
gcccacatgactcaaggcgacttttacggcagcgaaaaagccgcgctgatcgaagctgac
gacagcctgcgcatcgagctggtcgccaaagacggcagcaccaccgtgctgaaagaaaaa
accgccgtcaaagccgctgaagtcatcgactgcgccaccatgagccgcaaggccctgaaa
gccttcatcgccgagcagatcgccgatgccaaggccgccggcgtgctgctgtcggtgcac
ctgaaagccaccatgatgaaggtctccgacccgatcatgttcggcgtcatcgtcgaagag
ttctacaacgacgtgctgaccaagcacgccgctgccctggccgaagtaggcttcaacgcc
aacaacggtatcggcgacctgtacgcccgcatcaaggacctgccagctgacaagcaggcc
gagatcgaagccgacatccaggccctgtacgccgagcgaccggccctggccatggtcaac
tccgacaaaggcatcaccaacctgcacgtgccgagcgacgtgatcgtcgacgcctcgatg
ccggccatgatccgtgactcgggcaagatgtggaacaccgcaggcgaactgcaagacgcc
aaggccgtgatcccggaccgctgctacgccggcatctaccaggccaccatcgaagactgc
aaggtcaacggtgccttcgacccgaccaccatgggcagcgtgccgaacgttggcctgatg
gcgcaaaaagccgaagagtatggctcccacgacaagaccttccaggtcaaggctgacggc
gtggttcgtgtagtcgatggcaagggcaacgtggtgctggagcagaacgtcgaagccggt
gacatcttccgtatgtgccagaccaaagacgcgccgatccaggactgggtcaagctggcc
gtcaaccgtgcccgcctgagcaacaccccggcggtgttctggctggacccggctcgcgcc
cacgacggcgtcatgatcgagaaggtgcagaagtacctgaaagatcacgacaccaccggc
ctggacatccgcatcctggcaccggtcgacgccattaagttctccctggcccgcatccgc
gaaggcaaggacaccatctcggtgaccggcaacgtgctgcgtgactacctgaccgacctg
ttcccgatcatggagctgggcaccagcgccaagatgctgtcgatcgtaccgctgatgagc
ggcggtggcctgttcgaaaccggcgccggcggttcggctccgaagcacgtgcaacagctg
gttgaagagaacttcctgcgttgggattcgctgggtgaattcctggccctggccgcttcc
ctggagcacctgggcaacacctacgacaacccgcgcgccaaggttctggccaacaccctg
gaccaggctaccggcaagttcctcgacaccaacaagtcgccgtcgcgcaaagtcggcggt
atcgacaaccgcggcagccacttctacctgaccctgtactgggccgaagccctggctgct
cagacggacgacgctgccctgcaggcacgcttcgcaccactggcaaaaaccctggccgag
aacgaagcgaccatcgtcgccgagctcaacgccgttcagggcaagccagccgacatcggc
ggctactacgccccggatgccgagttgaccgccaaggtgatgcgcccaagccagaccctg
aacagcgccatcgctgccctgtaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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