KEGG T00537: Pput

Pseudomonas putida F1: Pput_2041

Entry

Pput_2041 CDS T00537

Gene name

alr

Definition

alanine racemase

Orthology

K01775

alanine racemase [EC:5.1.1.1]

Organism

ppf Pseudomonas putida F1

Pathway

ppf00473	D-Alanine metabolism
ppf01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:ppf00473]

SSDB

Motif

Pfam:

Ala_racemase_N Ala_racemase_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Structure

PDB:

4DYJ 4FS9

Position

2309543..2310772

AA seq 409 aa
MPFRRTLLAASLALLITGQAPLYAAPPLSMDNGTNALTVQNSNAWVEVSASALQHNIRTL
QAELAGKSKLCAVLKADAYGHGIGLVMPSIIAQGVPCVAVASNEEARVVRASGFTGQLVR
VRLASLSELEDGLQYDMEELVGSAEFARQADAIAARHGKTLRIHMALNSSGMSRNGVEMA
TWSGRGEALQITDQKHLKLVALMTHFAVEDKDDVRKGLAAFNEQTDWLIKHAKLDRSKLT
LHAANSFATLEVPEARLDMVRTGGALFGDTVPARTEYKRAMQFKSHVAAVHSYPAGNTVG
YDRTFTLARDSRLANITVGYSDGYRRVFTNKGHVLINGHRVPVVGKVSMNTLMVDVTDFP
DVKGGNEVVLFGKQAGGEITQAEMEEINGALLADLYTVWGSSNPKILVD

NT seq 1230 nt +upstreamnt +downstreamnt
atgccatttcgccgtacacttctggccgcatccctggccctgctgatcaccggccaagcc
ccactgtatgccgcccccccgttgtcgatggacaacggtaccaacgccctgaccgtgcaa
aacagcaatgcctgggtcgaagtcagcgccagcgccctgcagcacaacatccgcacgctg
caggccgagctggccggcaagtccaagctgtgcgccgtgctcaaggccgatgcctatggc
cacggtatcggcctggtaatgccatcgatcatcgcccagggcgtgccctgcgtggcggtg
gccagcaacgaggaggcccgcgtggtccgcgccagtggcttcaccgggcaactggtgcgg
gtacgcctggccagcctaagcgagctggaagatggcttgcagtacgacatggaagagctg
gtgggcagcgcggaatttgcccgccaggccgatgccatcgccgcgcgccatggcaagacc
ttgcgcattcacatggcgctcaactccagcggcatgagccgcaacggggtggagatggcc
acctggtccggccgtggcgaagcgctgcagatcaccgaccagaagcacctcaagctggtc
gcgctgatgacccacttcgccgtggaagacaaggacgatgtccgcaagggcctggcggcc
ttcaacgagcagaccgactggttgatcaagcacgcgaagctcgaccgcagcaagctcacc
ctgcacgccgccaactcgttcgctacgctggaggtgccggaagcgcgcctggacatggta
cgaacggggggcgcgctgttcggcgacaccgtgccggcgcgcaccgagtacaagcgtgcg
atgcagttcaaatcgcacgtggctgcggtgcacagctatccggctggcaacaccgtgggc
tatgaccgcaccttcaccctggcccgtgattcgcgcctggccaacattacggtcgggtac
tccgacggctaccgccgggtattcaccaacaagggccatgtgctgatcaacggccaccgt
gtgccggtggtgggcaaggtgtcgatgaacacgctgatggtcgatgtcaccgacttcccg
gacgtgaaggggggcaacgaagtggtgctgttcggcaagcaggccgggggcgaaatcacc
caggccgagatggaagaaatcaacggcgcgttgctcgccgatctgtacaccgtatggggc
agttccaacccgaagatcctcgtcgactga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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