KEGG P.putida_F1: Pput

Pseudomonas putida F1: Pput_2895

Entry

Pput_2895 CDS P.putida_F1

Definition short-chain dehydrogenase/reductase SDR

Orthology K10620 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase
[EC:1.3.1.58]

Pathway ppf00621 Biphenyl degradation

Class Metabolism; Xenobiotics Biodegradation and Metabolism; Biphenyl
degradation [PATH:ppf00621]

SSDB

Motif Pfam: adh_short KR 2-Hacid_dh_C ADH_zinc_N ATP_bind_3 3HCDH_N
PROSITE: ADH_SHORT

Other DBs NCBI-GI: 148548107
NCBI-GeneID: 5191657
JGI: Pput2895
UniProt: A5W4G5

Position complement(3284343..3285122)

AA seq 259 aa
MSTLSRNALPLEGQVAVVTGGAHGIGLGIVERLLGLGARVTASDIDESGLSLLCERLAAK
HADAIAVHAADLSEEQGAQGLHRAAVERFGSVQILVNCAGGGVIRPFLEHTPETLKATID
RNLWTALWCSRVFLPDMLARQYGRIINIGADSVRNGLPDHAAYNAAKGGMHGLTTGLARE
FARQGVTVNTVAPCAVNTEVWVRIKNANPELAQRFLDVIPMGRVGEIEEVASMVGYLAQP
EAAFVTGQVISVNGGSTML

NT seq 780 nt +upstreamnt +downstreamnt
atgagcacgctgagcagaaacgccttgcccttggagggacaggtcgcagtagttacgggc
ggagcccacggtatcggtctggggatcgtcgagcggctgctggggttgggggcccgggtc
accgcctcggatatcgatgagtcgggcctctcgttgctttgcgagcgtctggccgccaag
catgcggacgctatagcggtgcatgccgccgatctctctgaagagcaaggtgcccaggga
ctgcaccgggctgcggtcgagcgcttcggttcggtacagatactggtgaactgcgcgggg
ggcggtgtgatccggcctttcctggagcatacacccgagaccttgaaggccaccatcgat
cgtaacctgtggactgcgttgtggtgcagccgggtattcctgccggacatgcttgctcgg
cagtacggtcggatcatcaacatcggcgccgactcggtacgcaacggtctgccggaccat
gcggcctacaacgcagccaagggcggtatgcacggactgaccaccggcctggcgcgcgag
ttcgcccgccagggcgttacggtgaacacggttgcgccgtgcgcggtgaacaccgaagtg
tgggtcagaatcaagaacgccaaccccgagctcgcccagcgatttctggatgtcattccg
atgggccgggtgggcgagatcgaagaggttgcgtcgatggttggctacctggctcagccg
gaggcggccttcgtcaccggtcaggtaatcagcgtcaacggcggcagcacaatgctgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PPF (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (19)

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