KEGG   Pseudomonas putida F1: Pput_3786
Entry
Pput_3786         CDS       T00537                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ppf  Pseudomonas putida F1
Pathway
ppf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Pput_3786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppf03400]
    Pput_3786
DNA repair and recombination proteins [BR:ppf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Pput_3786
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Pput_3786
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 HAMP Viral_helicase1
Other DBs
NCBI-ProteinID: ABQ79910
UniProt: A5W700
Position
complement(4247755..4249770)
AA seq 671 aa
MSEFQLVTRFQPAGDQPEAIRQLVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIRKRVAAGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNVTGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGAAV
PGARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDE
IAQLRERLISS
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtccgagttccagctcgtcacacgtttccagccggctggcgaccagcccgaggctatc
cgccagttggtcgaaggcatagaggcggggctgtcgcaccagacgttgctcggggtgacc
ggttcgggcaagaccttcagcattgccaacgtcatccagcaggtgcagcgcccgacgctg
gtgctggcgcccaacaagacgctggccgcccagttgtacggggagttcaaggcattcttc
cccaacaacgcggtggagtacttcgtttcctattacgactactaccagccggaagcctac
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgtgacgcgatcatcgtgaccacc
gtgtcgtgcatctacggcctgggcagccccgagacctacctgaaaatggttctgcacgtg
gaccgtggcgacaagctcgaccagcgcgcgctgctgcgccggttggccgacctgcagtac
acccgcaacgaaatggactttgcccgcgccaccttccgggtacgcggtgacgtgatcgac
atcttcccggccgaatcggatctggaagccatccgcatcgagctgttcgatgatgaagtg
gagaacatcgccgccttcgatccgttgaccggcgaggttttccgcaagctgccacgtttc
acgttctaccccaagagccactacgtcaccccgcgggaaacgctgcttgaagcagtggag
ggcatcaaggaagaactgaaggagcgtctggagtacctgcacaaggccaacaagctggtc
gaagcgcagcgtctggagcaacgtacccgcttcgatctggagatgatcctcgagctgggc
tactgcaacggcatcgaaaactactcgcgctacctgtccgggcgtccggccggggcgccg
ccgcccaccctgtacgattacctgccgcctgatgcgctgctggtgatcgacgaatcacac
gtcagcgttccgcaggtcggcgccatgtacaagggcgaccgttcacgcaaggagaccctg
gtcgagtacggcttccgcatgccttcagcgctggacaaccggccgatgcgtttcgacgag
tgggaggatgtcagcccgcagaccattttcgtttcggccactccggggccctacgaggct
gagcatgccgggcgcgtggtggagcaggtggtgcgcccgaccgggctggtcgacccgcag
gtagaggtgcgcccggcgctgacccaggtcgacgacctgctgtccgagatccgcaagcgt
gtcgcggcaggcgagcgagtgctggcgaccacgttgaccaaacgcatggccgaggacctc
agcgattacctggccgaccacgacgtgcgggtacgctacctgcactcggacatcgacacg
gtggagcgggtggagattatccgtgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggctatcctcgat
gcggacaaggaaggttttctgcgttccgagcgctccctgatccagaccattggccgcgcg
gcacgtaacctcaatggccgggccattctgtacgccgataacgtaacaggttcgatgcag
cgggccattgacgaaaccgagcgtcgccgcgagaagcagatcgccttcaacgaagccaac
ggcatcgtgcccaagggcgtggtcaaggacatcaccgacatcatggagggtgccgccgtg
cccggtgcgcgcagcaagaagcgcaagggcatggccaaggcggcggaggagagcgcccgt
tacgaggccgaactgcgtacgccgggcgagatcaccaagcgcatcaagcagttggaagag
aaaatgatgcagttcgcccgcgacctggagttcgaagctgcggcgcagctgcgtgacgag
attgcgcagctgcgggagcggttgattagcagctga

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