KEGG   Pseudomonas putida F1: Pput_4999Help
Entry
Pput_4999         CDS       T00537                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppf  Pseudomonas putida F1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppf00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pput_4999
Enzymes [BR:ppf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pput_4999
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pput_4999
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5618027..5618839)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQPCKVCGTELREVKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtagaaaccacccggcgcggtattgcgccacacctggaaggc
cagcgcgtcagccgtgtggtggtacgcgaccggcgtctgcgctggccgattccggaagac
ctcgatgtgcgcctgtcagggcagcgcatcgtcagcgtggagcgacgtgccaagtacctg
ttgatcaatgccgaagtgggtacgctgatcagccacttgggcatgtcgggcaacctgcgg
ctggtcgagctgggcttgccggcggccaagcatgagcatgtcgacatcgagctggagtcc
gggctgatgctgcgctacaccgacccacgccgctttggtgccatgctgtggagcctggac
cctctgaaccatgagctactgctgcgcttggggcctgagccgctgaccgacctgttcgat
ggtgaacggctgttccagctgtcccgcgggcggtcgatggcggtcaagccgttcatcatg
gacaacgcggtggtggtaggggtgggcaacatctacgccaccgaggcgctgtttgccgcc
ggtatcgacccacgccgggaggcgggcgggatttcccgggcgcgctacctgaaactggcg
atcgagatcaaacgggtgctggcggcggccatcgagcagggcggtaccaccctgcgcgac
tttatcggtggcgacgggcagccggggtacttccagcaggaactgtttgtgtacgggcgt
ggcggacagccgtgcaaggtatgcggcactgagttgcgcgaagtgaagctggggcagagg
gcgagcgtgtactgcccgcgctgccaacgctga

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