KEGG T00650: PputGB1

Pseudomonas putida GB-1: PputGB1_0697

Entry

PputGB1_0697 CDS T00650

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

ppg Pseudomonas putida GB-1

Pathway

ppg00020	Citrate cycle (TCA cycle)
ppg00620	Pyruvate metabolism
ppg00630	Glyoxylate and dicarboxylate metabolism
ppg00680	Methane metabolism
ppg01100	Metabolic pathways
ppg01110	Biosynthesis of secondary metabolites
ppg01120	Microbial metabolism in diverse environments

Module

ppg_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ppg_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppg_M00012	Glyoxylate cycle
ppg_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppg00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ppg00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ppg00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:ppg00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C Glyco_hydro_4

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

795099..796028

AA seq 309 aa
MNKLTIVGAGLVGEAAAQIIARDELCRELVLMDVQGELAQGKALDVWQAAVESGSDTRVY
GGAKAEMLDGSDLVVITAGVPRKPGQSRQDVLSINLPILDGIMTDIKHHAPAATVLVVSN
PVDVLTYRAWSVSGLGRDKVFGQAGVLDTARMKCFIAEQTGFSAKDITALVLGGHGDSMV
PLMRYCQIGSVPLSHFLSSEQIEQIVERTRKGGGEILGLKKMGSACDAPGVAIAQMVDAI
ANGRNRILPAVAILQGEYGRKDIAMGVPCVLADEGLARVIELPLDAQEQAMFDQSADQVA
RDIDEMKAL

NT seq 930 nt +upstreamnt +downstreamnt
gtgaacaaattgacaatcgtaggtgccggcctggtcggcgaggccgcggcgcagatcatt
gcccgggatgagttgtgccgtgagctggtgttgatggatgttcagggcgagctggcgcag
ggcaaagcgctggacgtgtggcaggccgccgtggagtctggctcggatacccgagtctac
ggcggggccaaggccgaaatgctggacggttccgacctggtggtgattacggcgggcgta
ccgcgcaagcccggccagtcacgtcaggatgtgctgagcatcaacctgccgatactggat
ggcatcatgacggacatcaaacaccatgccccggcagcgacggtattggtggtgtccaac
ccggtcgacgtgctgacctatcgcgcctggagcgtcagcgggctggggcgcgacaaggtg
tttgggcaggcgggcgtgctggataccgcacgcatgaagtgtttcatcgccgagcaaacc
ggcttttctgccaaggacatcacggcgctggtgctgggggggcatggcgacagcatggtg
ccgctgatgcgctactgccagatcggctcggtgccgctgtcgcattttctctccagcgag
cagatcgagcagattgtcgagcgaactcgcaaaggcggcggcgagattctgggcttgaag
aagatgggcagcgcctgcgatgcaccgggcgtggcgattgcacagatggtggatgccatc
gccaatgggcgaaaccgcattttgccggctgtggcgattctgcagggtgaatatgggcgc
aaggatattgccatgggcgtgccctgtgtactcgcagacgaggggcttgcgcgggtgatc
gagttgccgctggatgcgcaggaacaggcgatgttcgaccagtctgcggatcaggtggcg
cgggatattgatgagatgaaggctttgtaa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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