KEGG   Pseudomonas putida GB-1: PputGB1_1025
Entry
PputGB1_1025      CDS       T00650                                 
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
ppg  Pseudomonas putida GB-1
Pathway
ppg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PputGB1_1025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppg03400]
    PputGB1_1025
Enzymes [BR:ppg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     PputGB1_1025
DNA repair and recombination proteins [BR:ppg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PputGB1_1025
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABY96935
UniProt: B0KRE1
Position
complement(1168759..1170150)
AA seq 463 aa
MMPAMIKDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFT
LKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGAL
RLAFEALKEKLGAEGLFSTERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELN
LIPTAVQGREAIAQIVRAIRLADSLGFDALILARGGGSLEDLWCFNEEAVARAVAACVTP
IVSAVGHETDVSISDFVADMRAPTPSAAAELLAPDNSGLQQRLDGLQRRLLLRMQNRLTH
DRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDTRLAAQHP
GRNLKLLKQRLDSLAERLPRAMRDVLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDDQ
GQAIRSAEQTRNGQRLTARLNEGELLVRVEDNHQTPVTLSLLD
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgatgcctgccatgatcaaagaccccttcgaacgactcggcctggaccgcgaggtcctt
accgtcagccaactcaatggccgcgcccgcgtgctgctggaagacgtgttccgcagcgtc
tgggtggaaggcgaaatctccaacctcgcccgcccggcgtccggccacatgtacttcacc
ctcaaggacagtggcgcccaggtgcgttgtgcgttgttccgacagaacgccacacgggtg
cgccaagccctgcgcgacggcctggcggtgcgggtgcgcggcaaggtttcgctgttcgag
gggcgtggcgactaccagctgattctcgacaccgtcgagccggccggcgatggtgccctg
cggctggccttcgaggcgctgaaggaaaagctcggtgccgaggggctgttcagcaccgaa
cgcaagaagccgctgccagcccacccgcaacgcatcggcatcatcacctcgcccacgggc
gctgtgatccgcgacatcatcagcgtgttcggccgccgtgccccgcaggtggaactgaac
ctgattcctacggcagtacaaggccgcgaagccatcgcgcagatcgtgcgcgccattcgc
ctggccgacagccttggcttcgatgcactgatcctggcccgtggtggcggctcgctggag
gacctgtggtgcttcaacgaagaagccgtggcgcgtgccgtggccgcctgcgtcaccccg
atagtcagcgccgtgggccatgaaaccgacgtatcgatcagcgacttcgtcgccgacatg
cgcgcgcccaccccgtctgccgccgccgagctgctggcccccgacaacagcggcctgcag
caacgcctggatggcctgcagcggcgcctgctcctgcgcatgcagaaccgcctgacccac
gaccgcctgcgcctggagtcactgacccggcgcctgcgccacccaggcgagcgcttgcgt
cagcaggcacagcgcctggacgacctggacatgcgcctgcgtcgcgccttcatgctcaac
ctcaaccagcgccgcgaacgcctggcgcgcctggacacccgcctggccgcgcagcacccg
gggcgtaacctgaagctgttgaaacaacgcctggacagcctggccgagcgcctgccacgg
gccatgcgcgatgtgttgaaagaccgtcgccaacgcttccaggcccaactgcaaaccctg
caggtggtcagcccgctggccaccctcgcccgcggctacagcatcctgctggacgaccag
ggccaggccattcgcagcgccgaacaaacccgcaatggccagcgcctcaccgcccgcctg
aacgaaggcgagctgctggtgcgggtcgaagacaaccaccagaccccggtcaccctctca
ctactggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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