KEGG T00650: PputGB1

Pseudomonas putida GB-1: PputGB1_3617

Entry

PputGB1_3617 CDS T00650

Definition

isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

ppg Pseudomonas putida GB-1

Pathway

ppg00020	Citrate cycle (TCA cycle)
ppg00480	Glutathione metabolism
ppg01100	Metabolic pathways
ppg01110	Biosynthesis of secondary metabolites
ppg01120	Microbial metabolism in diverse environments
ppg01210	2-Oxocarboxylic acid metabolism
ppg01230	Biosynthesis of amino acids

Module

ppg_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ppg_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ppg00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:ppg00480]

SSDB

Motif

Pfam:

IDH DUF4115

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

4017764..4019989

AA seq 741 aa
MPTRSKIIYTFTDEAPALATYSLLPIVEAFTACADIAVETRDISLAGRILAAFPEQLGAE
KRVGDHLAELGQLATTPEANIIKLPNISASVPQLKAAIKELQGKGFNIPDYADEPATADE
KESRARYDRIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMTQG
DFYGSEKAALIEGDDSLRIELVGNDGSTTVLKEKTAVKAAEIIDCATMSRKALKAFIAEQ
IADAKASGVLLSVHLKATMMKVSDPIMFGVIVEEFYNDVLAKHAAALAEVGFNANNGIGD
LYARIKDLPADKQAEIEADIQALYADRPALAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWNTAGELQDAKAVIPDRCYAGIYQATIEDCKKHGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFQIKADGVVRVVDGKGNVVLEQNVEAGDIFRMCQTKDAPIQDWVKLAVNRARL
SDTPAVFWLDPARAHDGVMIEKVQKYLKDHDTTGLDIRVLAPVDAIKFSLARIREGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFL
RWDSLGEFLALAASLEHLGNTYDNPRAKVLANTLDQATGKFLDTNKSPSRKVGGIDNRGS
HFYLTLYWAEALAAQADDAALQARFAPLAKTLAENEATIVAELNAVQGKPADIGGYYAPD
AELTAKVMRPSQTLNSAIAAL

NT seq 2226 nt +upstreamnt +downstreamnt
atgcccacccgttccaagatcatctataccttcaccgacgaagcccccgccctcgccacc
tactcgctgctgccgatcgtcgaagctttcacagcttgcgctgacatcgccgtcgaaact
cgcgacatctccctggctggccgtatccttgccgccttcccggagcaactgggcgcagag
aagcgagtaggcgatcacctggcggaactgggccagctggctaccacccctgaagccaac
atcatcaagctgccgaacatcagcgcctcggtaccgcagctcaaagccgcgatcaaggaa
ctgcaaggcaagggcttcaacatccctgactacgccgacgagccggccaccgcggacgag
aaagagtcccgcgcccgctacgaccgcatcaagggttccgccgtgaacccggtgctgcgc
gaaggcaactccgaccgccgcgcgccgctgtcggtcaagaactacgcccgcaagcacccg
cacaagatgggcgcttgggccgccgactccaagtcgcacgttgcccacatgacccaaggc
gatttctacggcagcgagaaggccgcactgatcgaaggtgacgacagcctgcgcatcgag
ctggtcggcaacgatggcagcaccaccgtgctgaaagaaaagaccgccgtcaaagccgcc
gaaatcatcgactgcgccaccatgagccgcaaggccctgaaagccttcatcgccgagcag
atcgccgatgccaaggcttctggcgtgctgctgtcggttcacctgaaagccaccatgatg
aaggtctccgacccaatcatgttcggcgtcatcgtcgaagagttctacaacgacgtgctg
gccaagcacgccgcagcactggccgaagtgggcttcaacgccaacaacggtatcggtgac
ctgtacgcccgcatcaaggacctgccagctgacaagcaggccgagatcgaagccgacatc
caggccctgtacgccgaccgcccagccctggccatggtcaactccgacaaaggcatcacc
aacctgcacgtgccgagcgacgttatcgtcgacgcctcgatgccagccatgatccgtgac
tcgggcaagatgtggaacaccgctggcgaactgcaagacgccaaggccgtgatcccggac
cgctgctacgccggcatctaccaggccaccatcgaagactgcaagaaacacggcgccttc
gacccgaccaccatgggcagcgtgccgaacgttggcctgatggcgcaaaaggccgaagag
tacggctcccacgacaagaccttccagatcaaggccgacggcgtcgtgcgcgtggtcgat
ggcaagggcaacgtcgtgctggaacagaacgtcgaagccggtgacatcttccgcatgtgc
cagaccaaagacgctccgatccaggattgggtcaagctggccgtcaaccgcgcccgcctg
agcgacaccccggcggtgttctggctggacccggctcgcgcccacgacggtgtgatgatc
gagaaggtacagaagtacctgaaagatcacgacaccactggcctggacatccgcgtactg
gctccggtcgacgccatcaagttctccctggcccgcatccgcgaaggcaaggacaccatc
tcggtgaccggcaacgtgctgcgcgactacctgaccgacctgttcccgatcatggaactg
ggcaccagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgttcgaa
accggcgccggcggttcggcgcccaagcacgtacagcagctggttgaagagaacttcctg
cgttgggactcgctgggtgaattcctggccctggccgcttccctggagcacctgggcaac
acctacgacaacccgcgcgccaaggttctggccaacaccctggaccaggctaccggcaag
ttcctcgacaccaacaagtcgccgtcgcgcaaggtcggtggtatcgacaaccgcggcagc
cacttctacctgactctgtactgggctgaagccctggccgctcaggctgacgacgctgcc
ctgcaggcacgcttcgcaccgctggcaaaaaccctggccgagaacgaagcgaccatcgtc
gccgagctcaatgccgttcagggcaagccagccgacatcggtggttactacgccccggat
gccgagctgaccgccaaggtgatgcgcccaagccagaccctgaacagcgccattgccgcc
ctgtaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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