KEGG T00650: PputGB1

Pseudomonas putida GB-1: PputGB1_4517

Entry

PputGB1_4517 CDS T00650

Gene name

murE

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

ppg Pseudomonas putida GB-1

Pathway

ppg00300	Lysine biosynthesis
ppg00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:ppg00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:ppg00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(5054506..5055996)

AA seq 496 aa
MMTMPLSKLFAHASRDPLIRELTLDSRNVRPGDLFLAVPGAKVDGREHIADALTRGAAAV
AYEEQGATVLPLTEVPLIPVKGLIAQLSDVAGRFYGEPSRQLNLVGVTGTNGKTSVTQLV
AQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLYDLKKQGAKAVAMEVSSH
ALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDAFGR
RLAADFARRPSVDHIDTRLLSYSLENPDASLFCREAAFSDDGVRATIVTAQGERILRSQL
LGRFNLSNMLAAVATLLALDYALDEILKVTPQLHGPVGRMQRLGGGDKPLVVVDYAHTPD
ALEKVLEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPQR
IFDDIRPGFARPVSVEFVAGRGEAIAQLIASAAANDVIVLAGKGHEDYQEINGERHDFSD
LTEAEKALAAWEAPHA

NT seq 1491 nt +upstreamnt +downstreamnt
atgatgacaatgccattaagcaaacttttcgcccacgccagccgtgacccgctgattcgt
gaactgaccctggacagccgcaacgtgcgcccgggtgacctgttcctggccgtgccgggt
gccaaggtcgatggccgcgagcatatcgccgatgccttgacccgtggtgccgccgccgtg
gcctatgaagagcagggcgccaccgtgctgccgctgaccgaagtgccattgattccggtc
aagggcctgatcgcacagctgtcggatgtcgccgggcgtttttatggcgaacccagccgc
cagctgaacctggtcggtgtgaccgggaccaacggcaagaccagcgttacccaattggtg
gcccaggcgctcgacctgctcggccagcgctgcggcttgatcggcaccctgggtaccggc
ttctacggggagctgcagagcggccgtctgaccacgcccgacccgattgccgtgcagtcg
accctttacgatttgaaaaagcagggcgccaaggctgtggccatggaggtttcctctcac
gccctggagcaaggccgagtcgccgcattggagttcgacatcgcggtgatgaccaacctg
tcccgcgaccacctcgactaccacggcagcatggaggcctatgaggccgccaaggccaag
ctgttcgcctggcccagcctgcgttgccaggtggtcaacctggatgacgcctttggccgt
cgcctggccgctgactttgcccgccgtccgagcgtcgaccatatcgacacccggctgctg
agctacagcctggaaaacccagatgcctcgctgttctgtcgcgaggccgcgttcagtgac
gatggcgtgcgcgcgacgatcgttaccgcacaaggtgagcgtatcctgcgcagtcagctg
ctggggcgcttcaacctgagcaacatgctcgccgctgtcgcgacactgctggcactggat
tatgcactggacgaaatcctcaaggtcaccccgcaactgcacggtccggtaggccgtatg
cagcgcctgggtggcggcgacaaaccgctggtggtggtcgattacgcccacaccccggac
gcccttgaaaaagtgctcgaagcgctgcgcccacacgcccacggtaagttgctgtgcctg
ttcggctgcggcggcgaccgtgatcgcggcaagcgcccgctgatggccgaagtggccgag
cgcctggccgatcgcgtactggtcaccgatgacaacccacgtaccgaagacccacagcgc
atcttcgacgacatccgtcccggtttcgcccggcctgtctcggtcgagttcgttgccggt
cgtggcgaggccatcgcgcagttgattgcctccgctgctgccaacgacgtgatcgtgctg
gctggcaaggggcacgaggattaccaggagatcaatggcgagcgccatgacttctccgat
ttgaccgaagccgaaaaggcacttgcagcctgggaggcgccacatgcttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PPG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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