KEGG P.putida_GB1: PputGB1

Pseudomonas putida GB-1: PputGB1_4568

Entry

PputGB1_4568 CDS P.putida_GB1

Gene name algL

Definition poly(beta-D-mannuronate) lyase (EC:4.2.2.3)

Class

SSDB

Motif Pfam: Alginate_lyase

Other DBs NCBI-GI: 167035559
NCBI-GeneID: 5872376
JGI: PputGB14568
UniProt: B0KGQ9

Position 5106767..5107870

AA seq 367 aa
MTLLKRISSPALLALALFGGAAHAALVPPQGYYEGIEKLKTGDGNFRCEAAPKPYTGALQ
FRSKYEGSDKARATLNVASEKAFRKSTEDITTLEKGVSKMVGQYMRDGRPAQLDCTLAWL
GTWARADALLSTDYNHTGKSMRKWALGSMSGSWLRLKFSHSQPLAAHQAEAEVIEKWFAR
LAEQTVRDWSDLPLEKINNHSYWAAWSVMATAVATDRRDLFDWAVKEYKVGANQVDDQGF
LPNEIKRKQRALAYHNYALPPLAMIASFAQANGVDLRKENNFALQRLGEGVLAGARDPSQ
FKARTGEKQDMKDLKVDSKYAWLEPWCELYHCVGDTLQRKHGMQPFNSFRLGGDLTRVYD
PNAESKK

NT seq 1104 nt +upstreamnt +downstreamnt
atgaccctattgaagcgaatttccagccccgccctgctcgctttggccctgtttggcggt
gccgcgcacgctgcgctggtacccccgcagggttactacgaggggatcgaaaagctcaag
accggcgacggcaatttccgctgcgaagcggcgcccaagccgtacaccggcgcgttgcag
tttcgcagcaaatacgaaggctctgacaaggcgcgggcaacgctcaatgttgcctcggaa
aaggccttccgcaagtcgaccgaagacatcaccacgcttgagaaaggcgtgagcaagatg
gttggccagtacatgcgcgatggccgcccggcgcagctcgattgcaccttggcctggctg
ggcacttgggcgcgcgccgacgcattgctgtccaccgactacaaccacaccggcaagtcg
atgcgcaaatgggcactgggcagcatgagcggctcgtggctgcgcctgaagttctcccac
tcgcagccgctggccgcgcaccaggctgaagccgaagtcatcgaaaaatggttcgcccgc
ctggctgaacagaccgtgcgcgactggagcgacctgccgctggagaagatcaacaaccac
agctactgggcggcctggtcggtcatggcgaccgctgtcgccaccgaccgtcgcgacctg
ttcgactgggccgtgaaggaatacaaggtgggcgccaaccaggtggatgaccagggcttt
ctgcccaacgaaatcaagcgcaagcagcgcgcactggcctaccacaactatgccctgccg
ccactggcgatgattgccagctttgcccaggccaatggcgtggacctgcgcaaagagaac
aacttcgccctgcagcgtctgggtgaaggcgtactggccggtgcccgcgacccgagccag
ttcaaggcccgcaccggcgagaagcaggacatgaaggacctcaaggtcgacagcaagtat
gcctggctcgaaccctggtgcgaactgtaccactgcgtcggcgacaccctgcagcgcaag
cacggcatgcagccgttcaacagcttccggctgggcggcgacctgacccgggtctacgac
ccgaacgcagagagcaagaaatag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PPG (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)

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