KEGG   Pseudomonas putida GB-1: PputGB1_5175Help
Entry
PputGB1_5175      CDS       T00650                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppg  Pseudomonas putida GB-1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ppg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PputGB1_5175
Enzymes [BR:ppg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PputGB1_5175
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PputGB1_5175
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5787009..5787821)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSLD
PLNHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQPCKVCGTALREVKLGQRASVYCPRCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgccagaagtagaaaccacccggcgcggtatcgcaccgcacctggaaggc
caacgcgtcagccgtgtggtggtgcgtgaccggcgcctgcgctggccgattccggaagac
ctcgatgtgcgcctgtcagggcagcgtatcgtcagcgtcgaacgacgcgccaagtacctg
ttgatcaatgccgaggtcggtacgctgatcagccacctgggcatgtcgggcaacctgcgt
ctggtcgagttgggcttgccggcggccaagcatgagcacgtcgacatcgagctggagtcg
gggctgatgctgcgctacaccgacccgcgccgctttggtgccatgttgtggagcctggac
ccgctcaaccacgaactgctgctgcgcctggggccggagccgctgaccgacctgttcgac
ggtgagcgcctgttccagctgtcccgcgggcgatcgatggcggtcaaaccgttcatcatg
gacaacgcggtggtggtgggggtgggcaacatctacgccaccgaggcactgttcgctgcg
ggtatcgacccacgtcgggaggcgggcgggatttcccgcgcgcgctatttgaagctggcg
atcgagatcaagcgggtgctggcggcggcaatcgagcagggcggtactaccctgcgcgac
tttatcggtggcgatgggcagccggggtacttccagcaggaattgttcgtctacgggcgg
ggcgggcagccgtgcaaggtgtgcggcacggcgctgcgcgaggtgaagctggggcaacgg
gcgagcgtgtactgcccgcgctgccagcgctaa

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