KEGG   Pseudomonas putida GB-1: PputGB1_5349
Entry
PputGB1_5349      CDS       T00650                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ppg  Pseudomonas putida GB-1
Pathway
ppg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ppg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PputGB1_5349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppg03021]
    PputGB1_5349
   03400 DNA repair and recombination proteins [BR:ppg03400]
    PputGB1_5349
Enzymes [BR:ppg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PputGB1_5349
Transcription machinery [BR:ppg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PputGB1_5349
DNA repair and recombination proteins [BR:ppg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PputGB1_5349
SSDB
Motif
Pfam: RNA_pol_Rpb6 Gp45_2
Other DBs
NCBI-ProteinID: ABZ01231
UniProt: B0KQA1
Position
5973629..5973892
AA seq 87 aa
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRVAWENDKPTVVALREIAEGIVT
NEFIAAEEIVTEDPVFAAFEDENNEAV
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcccgcgtaactgttgaagactgcctggaacacgtggataaccgcttcgagctggtc
atgctctcgaccaagcgcgctcgccagctggcgaccggcggcaaagagccacgcgttgcg
tgggaaaacgacaagccgaccgttgttgccctgcgcgaaatcgccgaaggcatcgtcacc
aacgaattcatcgccgctgaagagatcgtcaccgaggatccggtgttcgccgcgttcgag
gacgagaacaacgaggctgtctga

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