KEGG   Pseudoalteromonas phenolica: PP2015_3126
Entry
PP2015_3126       CDS       T04165                                 
Name
(GenBank) Rep helicase, a single-stranded DNA-dependent ATPase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
pphe  Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:pphe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pphe03400]
    PP2015_3126
Enzymes [BR:pphe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PP2015_3126
DNA repair and recombination proteins [BR:pphe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PP2015_3126
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 ResIII AAA_11 AAA_22 PhoH
Other DBs
NCBI-ProteinID: ALO43605
UniProt: A0A0S2K699
Position
I:complement(3558857..3560872)
AA seq 671 aa
MKLNPKQDEAVKYISGPCLVLAGAGSGKTRVITNKIAYLVQHCEYQAKNIAAVTFTNKAA
KEMRERVGQTLGKQEAKGLWVSTFHTLGLEVIKKELKTLGFKPGFSLFDDQDTHQLLAEL
TEKELDRDKDLLNLLKMQIGSWKNELILPERAISEAREPQKALFAQLYARYALQLRAYNA
LDFDDLIMIPTLLLAQNPDVRERWQARFRYLLVDEYQDTNTSQYQLVKLLVGERARFTVV
GDDDQSIYSWRGAKPQNLVLLSKDFPGLRLIKLEQNYRSAGRILKAANILIANNPHEFDK
KLFSELGYGDPIRVIATKDEEHEAERVVAEIISHKFMKRTSYKDYAILYRGNHQARVFEK
ALMSNRIPYKISGGMSFFARSEIKDIMAYLRLLVNQDDDNAFLRIVNTPRREIGPVTLEK
LGSLANEKHISLFEACFQPELASRLAGRGFNALMGFARWVVELSDRATRGDTLEAVKDMV
REINYEAYLYESSPSAKAAEMRMKNVSELYRWITDMITGDADNPPMTLPEVVSKLTLRDM
LERNEEEDDSDAVQLLTLHASKGLEYPHVFMVGMEEGFLPHQTSIDEDNVEEERRLAYVG
ITRAQQTLTMTYAKNRRQFGEVSTPELSRFVQELPQDDLQIEGQKKTVQSQQERMQSGQA
RVANLRAMLKR
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaaactcaatccaaaacaagatgaagcggttaagtatataagcggcccatgcctagtg
ttagcgggcgcaggctcaggtaagacgcgcgtaattaccaataaaattgcttaccttgtg
caacattgtgaataccaagcaaaaaacattgctgcggtaaccttcaccaataaagcagca
aaagaaatgcgtgagcgtgtagggcaaacgcttggcaagcaagaagcaaaaggcttatgg
gtgtctacgtttcacaccttgggtttagaggtcattaaaaaagagcttaaaacactgggt
ttcaaaccaggcttttcgttatttgacgatcaagatactcaccaacttttggcagaatta
accgaaaaagaattagacagagacaaagatctactgaatttgctgaagatgcaaattggc
agctggaagaacgaactaattttacctgaacgtgctattagtgaagcccgcgaaccacaa
aaagccttgttcgcacaactatacgcccgttatgcgttacagttacgcgcatataacgcg
ttagattttgatgacttaatcatgatccccactttgttgttggcgcaaaacccagatgtg
agagagcgctggcaggcgcgtttccgttatttactagtggatgaatatcaagataccaat
accagccagtatcagttggttaagctgctggtgggtgagcgcgcgcgttttaccgtggta
ggcgatgatgaccaatcgatttattcctggcgtggagcaaaaccacaaaatctagtattg
ctatcaaaggactttcctggtttacgcttgattaaattggagcaaaattaccgaagtgca
ggtcgaattctaaaagctgcgaatattttgattgccaataaccctcatgaatttgataaa
aagttgtttagtgaactcggttatggtgacccaattcgagtgatagcgaccaaagacgaa
gagcacgaagcagagcgcgtagtcgctgaaatcatctcccataagtttatgaagcgtact
agctacaaagattacgcgattttatatcgaggtaatcaccaagctcgggtatttgaaaaa
gcgctgatgagtaaccgcattccttacaaaatcagtggcggcatgtcgttctttgcgcga
agcgaaattaaagacattatggcttacttacgcctactggtgaatcaggacgatgacaac
gcatttttacgtattgtgaatacaccaagacgtgaaattggcccggttacgcttgagaag
ttaggtagcttagctaacgaaaaacacatcagtttattcgaagcatgctttcagcctgaa
ctggcaagtcgacttgcagggcgcggttttaatgcactgatggggtttgctcgctgggtc
gttgagctatcagatagagcaacgcgtggagacacattggaagctgtaaaagacatggta
cgtgaaattaattatgaagcctatttatatgagtcatcgcctagtgcaaaagcggctgaa
atgcgtatgaaaaatgtctctgagctatatcgttggatcaccgatatgataacgggtgat
gcagataatccgccaatgactttacctgaggtggtgagtaaactgacacttagggatatg
ctagagcgtaacgaagaagaagatgatagcgatgcagtgcagttgctaacattacatgcc
tctaaaggtttggaatatccgcatgtctttatggtggggatggaagagggattcttacca
caccaaaccagcattgacgaagataatgttgaagaagagcgccgtcttgcctacgttggg
atcactcgtgcacagcaaacattgaccatgacatatgcgaaaaatcgtcgtcagtttggc
gaggtatcaacacctgaactgagtcgctttgtgcaagaattaccacaagatgatctacaa
atagaaggtcaaaagaaaaccgtacaatcgcaacaagagcgtatgcaatcaggtcaggca
cgcgttgcaaacttgcgtgccatgttaaagagatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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